RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TRBV12-3P01733 135 aa20.1■□□□□ 0.81
SCAMP4-210ENST00000588555 RPLP1P05386 114 aaKnown RBP20.1■□□□□ 0.81
SCAMP4-210ENST00000588555 BCL2P10415 239 aa20.1■□□□□ 0.81
SCAMP4-210ENST00000588555 GCHFRP30047 84 aa20.1■□□□□ 0.81
SCAMP4-210ENST00000588555 PSMB3P49720 205 aa20.1■□□□□ 0.81
SCAMP4-210ENST00000588555 KHDC3LQ587J8 217 aa20.1■□□□□ 0.81
SCAMP4-210ENST00000588555 ZNF506Q5JVG8 444 aa20.1■□□□□ 0.81
SCAMP4-210ENST00000588555 IQCF2Q8IXL9 164 aa20.1■□□□□ 0.81
SCAMP4-210ENST00000588555 JMJD8Q96S16 334 aa20.1■□□□□ 0.81
SCAMP4-210ENST00000588555 IGHV3-35A0A0C4DH35 117 aa20.09■□□□□ 0.81
SCAMP4-210ENST00000588555 LOC102723971A0A1B0GUV8 181 aa20.09■□□□□ 0.81
SCAMP4-210ENST00000588555 ICAM4Q14773 271 aa20.09■□□□□ 0.81
SCAMP4-210ENST00000588555 PQLC2Q6ZP29 291 aa20.09■□□□□ 0.81
SCAMP4-210ENST00000588555 OR4X2Q8NGF9 303 aa20.09■□□□□ 0.81
SCAMP4-210ENST00000588555 SLC25A39Q9BZJ4 359 aaPredicted RBP20.09■□□□□ 0.81
SCAMP4-210ENST00000588555 ZFAND3Q9H8U3 227 aa20.09■□□□□ 0.81
SCAMP4-210ENST00000588555 TREM1Q9NP99 234 aa20.09■□□□□ 0.81
SCAMP4-210ENST00000588555 CRLF1O75462 422 aa20.08■□□□□ 0.81
SCAMP4-210ENST00000588555 OR5AU1Q8NGC0 362 aa20.08■□□□□ 0.81
SCAMP4-210ENST00000588555 GNB4Q9HAV0 340 aa20.08■□□□□ 0.81
SCAMP4-210ENST00000588555 CRYBA1P05813 215 aa20.08■□□□□ 0.8
SCAMP4-210ENST00000588555 ARL3P36405 182 aa20.08■□□□□ 0.8
SCAMP4-210ENST00000588555 PEA15Q15121 130 aa20.08■□□□□ 0.8
SCAMP4-210ENST00000588555 TOMM20LQ6UXN7 152 aa20.08■□□□□ 0.8
SCAMP4-210ENST00000588555 ANKRD34BA5PLL1 514 aa20.07■□□□□ 0.8
SCAMP4-210ENST00000588555 OR7C2O60412 319 aa20.07■□□□□ 0.8
SCAMP4-210ENST00000588555 KLHDC1Q8N7A1 406 aa20.07■□□□□ 0.8
SCAMP4-210ENST00000588555 C16orf95Q9H693 158 aa20.07■□□□□ 0.8
SCAMP4-210ENST00000588555 MANBALQ9NQG1 85 aa20.07■□□□□ 0.8
SCAMP4-210ENST00000588555 IFNA1P01562 189 aa20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 RELQ04864 619 aaPredicted RBP20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 SUN5Q8TC36 379 aa20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 WIPF2Q8TF74 440 aaPredicted RBP20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 LINC00052Q96N35 136 aa20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 SHANK2-AS3Q9BTD1 123 aa20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 SMDT1Q9H4I9 107 aa20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 TMEM218A2RU14 115 aa20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 H3BRN7 92 aa20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 LEMD1Q68G75 181 aa20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 NARS2Q96I59 477 aaKnown RBP20.06■□□□□ 0.8
SCAMP4-210ENST00000588555 PPT1P50897 306 aa20.05■□□□□ 0.8
SCAMP4-210ENST00000588555 RXFP4Q8TDU9 374 aa20.05■□□□□ 0.8
SCAMP4-210ENST00000588555 VAX2Q9UIW0 290 aa20.05■□□□□ 0.8
SCAMP4-210ENST00000588555 BMPR1BO00238 502 aa20.04■□□□□ 0.8
SCAMP4-210ENST00000588555 KRBOX1C9JBD0 128 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 PAGE4O60829 102 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 PYYP10082 97 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 UBE2E2Q96LR5 201 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 TMEM167BQ9NRX6 74 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 SETD2Q9BYW2 2564 aaPredicted RBP20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 IGHV3OR16-8A0A075B7F1 116 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 HSPB1P04792 205 aaKnown RBP20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 OR10J4P0C629 311 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 GP9P14770 177 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 ZP3P21754 424 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 FAM209BQ5JX69 171 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 STXBP6Q8NFX7 210 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 LINC01006Q8NI28 216 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 OR5B12Q96R08 314 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 PAXXQ9BUH6 204 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 OR51M1Q9H341 326 aa20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 PEF1Q9UBV8 284 aaKnown RBP20.03■□□□□ 0.8
SCAMP4-210ENST00000588555 CLPSL1A2RUU4 121 aa20.02■□□□□ 0.8
SCAMP4-210ENST00000588555 SFTA3P0C7M3 94 aa20.02■□□□□ 0.8
SCAMP4-210ENST00000588555 ADCYAP1P18509 176 aa20.02■□□□□ 0.8
SCAMP4-210ENST00000588555 TAGLN2P37802 199 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-210ENST00000588555 TCTEX1D4Q5JR98 221 aa20.02■□□□□ 0.8
SCAMP4-210ENST00000588555 RABAC1Q9UI14 185 aa20.02■□□□□ 0.8
SCAMP4-210ENST00000588555 TCF21O43680 179 aa20.01■□□□□ 0.79
SCAMP4-210ENST00000588555 SRP19P09132 144 aaKnown RBP20.01■□□□□ 0.79
SCAMP4-210ENST00000588555 CD81P60033 236 aa20.01■□□□□ 0.79
SCAMP4-210ENST00000588555 UBE2G2P60604 165 aa20.01■□□□□ 0.79
SCAMP4-210ENST00000588555 UBE2L3P68036 154 aaKnown RBP20.01■□□□□ 0.79
SCAMP4-210ENST00000588555 MEF2BQ02080 365 aaPredicted RBP20.01■□□□□ 0.79
SCAMP4-210ENST00000588555 FXYD5Q96DB9 178 aa20.01■□□□□ 0.79
SCAMP4-210ENST00000588555 NIPBLQ6KC79 2804 aaeCLIP20.01■□□□□ 0.79
SCAMP4-210ENST00000588555 ZNF98A6NK75 572 aa20■□□□□ 0.79
SCAMP4-210ENST00000588555 NDUFA7O95182 113 aa20■□□□□ 0.79
SCAMP4-210ENST00000588555 S100A7AQ86SG5 101 aa20■□□□□ 0.79
SCAMP4-210ENST00000588555 SLC35B3Q9H1N7 401 aa20■□□□□ 0.79
SCAMP4-210ENST00000588555 YTHDF2Q9Y5A9 579 aaKnown RBP20■□□□□ 0.79
SCAMP4-210ENST00000588555 NDUFA4O00483 81 aa20■□□□□ 0.79
SCAMP4-210ENST00000588555 GGCTO75223 188 aaKnown RBP20■□□□□ 0.79
SCAMP4-210ENST00000588555 LGALS1P09382 135 aaKnown RBP20■□□□□ 0.79
SCAMP4-210ENST00000588555 TMEM14CQ9P0S9 112 aa20■□□□□ 0.79
SCAMP4-210ENST00000588555 FAM74A7A6NL05 159 aa19.99■□□□□ 0.79
SCAMP4-210ENST00000588555 ARL2-SNX15V9GYD0 113 aa19.99■□□□□ 0.79
SCAMP4-210ENST00000588555 UNQ9165/PRO28630Q6UXU0 137 aa19.98■□□□□ 0.79
SCAMP4-210ENST00000588555 MRPS12O15235 138 aaKnown RBP19.98■□□□□ 0.79
SCAMP4-210ENST00000588555 ATP5G3P48201 142 aa19.98■□□□□ 0.79
SCAMP4-210ENST00000588555 C10orf91Q5T1B1 145 aa19.98■□□□□ 0.79
SCAMP4-210ENST00000588555 C11orf94C9JXX5 98 aa19.97■□□□□ 0.79
SCAMP4-210ENST00000588555 NDUFS6O75380 124 aaKnown RBP19.96■□□□□ 0.79
SCAMP4-210ENST00000588555 CDX1P47902 265 aaPredicted RBP19.96■□□□□ 0.79
SCAMP4-210ENST00000588555 CST9LP1Q5W188 147 aa19.96■□□□□ 0.79
SCAMP4-210ENST00000588555 CYB561D1Q8N8Q1 229 aa19.96■□□□□ 0.79
SCAMP4-210ENST00000588555 SEC11CQ9BY50 192 aa19.96■□□□□ 0.79
SCAMP4-210ENST00000588555 CRYBB3P26998 211 aa19.95■□□□□ 0.78
SCAMP4-210ENST00000588555 BPIFA4PQ86YQ2 179 aa19.95■□□□□ 0.78
SCAMP4-210ENST00000588555 TMEM190Q8WZ59 177 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms