RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 GPR183P32249 361 aa12.87□□□□□ -0.35
NFIX-210ENST00000588228 ADMP35318 185 aa12.87□□□□□ -0.35
NFIX-210ENST00000588228 ATP5G2Q06055 141 aa12.87□□□□□ -0.35
NFIX-210ENST00000588228 CHRDL1Q9BU40 450 aa12.87□□□□□ -0.35
NFIX-210ENST00000588228 TSPAN4O14817 238 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 RPL23P62829 140 aaKnown RBP12.86□□□□□ -0.35
NFIX-210ENST00000588228 SUMO1P63165 101 aaKnown RBP12.86□□□□□ -0.35
NFIX-210ENST00000588228 USF2Q15853 346 aaPredicted RBP12.86□□□□□ -0.35
NFIX-210ENST00000588228 LEMD1Q68G75 181 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 ZNF343Q6P1L6 599 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 ZNF600Q6ZNG1 722 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 Q6ZS46 218 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 CCDC140Q96MF4 163 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 DERL1Q9BUN8 251 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 ABCA1O95477 2261 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 NBPF19A0A087WUL8 3843 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 TRGV3P03979 118 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 CLEC3BP05452 202 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 NBEAP1P0C6P0 100 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 ADIRFQ15847 76 aa12.86□□□□□ -0.35
NFIX-210ENST00000588228 NOL4LQ96MY1 436 aaPredicted RBP12.86□□□□□ -0.35
NFIX-210ENST00000588228 C15orf54Q8N8G6 183 aa12.85□□□□□ -0.35
NFIX-210ENST00000588228 TCEAL7Q9BRU2 100 aa12.85□□□□□ -0.35
NFIX-210ENST00000588228 PRELID1Q9Y255 219 aa12.85□□□□□ -0.35
NFIX-210ENST00000588228 HELZ2Q9BYK8 2649 aaKnown RBP12.85□□□□□ -0.35
NFIX-210ENST00000588228 CELSR1Q9NYQ6 3014 aa12.85□□□□□ -0.35
NFIX-210ENST00000588228 TGOLN2O43493 480 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 CRYBB3P26998 211 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 S100A7P31151 101 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 CFHR3Q02985 330 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 CLEC19AQ6UXS0 136 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 BPIFA4PQ86YQ2 179 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 USMG5Q96IX5 58 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 ELOVL1Q9BW60 279 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 TMEM242Q9NWH2 141 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 RNF24Q9Y225 148 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 CSMD1Q96PZ7 3565 aa12.84□□□□□ -0.35
NFIX-210ENST00000588228 MAP1AP78559 2803 aaPredicted RBP12.83□□□□□ -0.35
NFIX-210ENST00000588228 CXorf65A6NEN9 183 aa12.83□□□□□ -0.35
NFIX-210ENST00000588228 ZNF98A6NK75 572 aa12.83□□□□□ -0.35
NFIX-210ENST00000588228 BMPR1BO00238 502 aa12.83□□□□□ -0.35
NFIX-210ENST00000588228 HIST1H1EP10412 219 aaKnown RBP12.83□□□□□ -0.35
NFIX-210ENST00000588228 MYCNOSP40205 109 aa12.83□□□□□ -0.35
NFIX-210ENST00000588228 TPPP2P59282 170 aa12.83□□□□□ -0.35
NFIX-210ENST00000588228 ZNF329Q86UD4 541 aa12.83□□□□□ -0.35
NFIX-210ENST00000588228 C2CD4CQ8TF44 421 aa12.83□□□□□ -0.35
NFIX-210ENST00000588228 BLNKQ8WV28 456 aa12.83□□□□□ -0.35
NFIX-210ENST00000588228 ZNF414Q96IQ9 312 aa12.83□□□□□ -0.35
NFIX-210ENST00000588228 CTDSP1Q9GZU7 261 aa12.83□□□□□ -0.35
NFIX-210ENST00000588228 TRBV20OR9-2A0A075B6H5 130 aa12.83□□□□□ -0.36
NFIX-210ENST00000588228 COLCA2A8K830 154 aa12.83□□□□□ -0.36
NFIX-210ENST00000588228 C9JCJ5 164 aa12.83□□□□□ -0.36
NFIX-210ENST00000588228 HOXA3O43365 443 aaPredicted RBP12.83□□□□□ -0.36
NFIX-210ENST00000588228 IGLV1-40P01703 118 aa12.83□□□□□ -0.36
NFIX-210ENST00000588228 LINC01551Q86U37 167 aa12.83□□□□□ -0.36
NFIX-210ENST00000588228 RABAC1Q9UI14 185 aa12.83□□□□□ -0.36
NFIX-210ENST00000588228 MT-ND4LP03901 98 aa12.82□□□□□ -0.36
NFIX-210ENST00000588228 RPL35P42766 123 aaKnown RBP12.82□□□□□ -0.36
NFIX-210ENST00000588228 RANP62826 216 aaKnown RBP12.82□□□□□ -0.36
NFIX-210ENST00000588228 RELQ04864 619 aaPredicted RBP12.82□□□□□ -0.36
NFIX-210ENST00000588228 RNF212Q495C1 297 aa12.82□□□□□ -0.36
NFIX-210ENST00000588228 OR4F17Q8NGA8 305 aa12.82□□□□□ -0.36
NFIX-210ENST00000588228 ISOC2Q96AB3 205 aa12.82□□□□□ -0.36
NFIX-210ENST00000588228 ZFAND3Q9H8U3 227 aa12.82□□□□□ -0.36
NFIX-210ENST00000588228 GNB4Q9HAV0 340 aa12.82□□□□□ -0.36
NFIX-210ENST00000588228 LY96Q9Y6Y9 160 aa12.82□□□□□ -0.36
NFIX-210ENST00000588228 HELTA6NFD8 242 aa12.81□□□□□ -0.36
NFIX-210ENST00000588228 CD5LO43866 347 aa12.81□□□□□ -0.36
NFIX-210ENST00000588228 SNRPCP09234 159 aaKnown RBP12.81□□□□□ -0.36
NFIX-210ENST00000588228 TOMM20LQ6UXN7 152 aa12.81□□□□□ -0.36
NFIX-210ENST00000588228 TMEM190Q8WZ59 177 aa12.81□□□□□ -0.36
NFIX-210ENST00000588228 ZNF586Q9NXT0 402 aa12.81□□□□□ -0.36
NFIX-210ENST00000588228 CLDN34H7C241 214 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 MRPS12O15235 138 aaKnown RBP12.8□□□□□ -0.36
NFIX-210ENST00000588228 IGLC2P0DOY2 106 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 PF4V1P10720 104 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 KRTAP1-1Q07627 177 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 HIST1H2BAQ96A08 127 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 PRSS22Q9GZN4 317 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 NPFFR1Q9GZQ6 430 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 IGHV3-35A0A0C4DH35 117 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 A0A0G2JLM5 398 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 PGPA6NDG6 321 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 PEX7O00628 323 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 SIGLECL1Q8N7X8 197 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 ANAPC16Q96DE5 110 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 YPEL4Q96NS1 127 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 Q9H3A6 140 aa12.8□□□□□ -0.36
NFIX-210ENST00000588228 CREBBPQ92793 2442 aa12.79□□□□□ -0.36
NFIX-210ENST00000588228 PDZD2O15018 2839 aa12.79□□□□□ -0.36
NFIX-210ENST00000588228 ZFHX3Q15911 3703 aa12.79□□□□□ -0.36
NFIX-210ENST00000588228 TRBV19A0A075B6N1 114 aa12.79□□□□□ -0.36
NFIX-210ENST00000588228 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.79□□□□□ -0.36
NFIX-210ENST00000588228 TMEM89A2RUT3 159 aa12.79□□□□□ -0.36
NFIX-210ENST00000588228 IGHG4P01861 327 aa12.79□□□□□ -0.36
NFIX-210ENST00000588228 SRP14P37108 136 aaKnown RBP12.79□□□□□ -0.36
NFIX-210ENST00000588228 TMEM95Q3KNT9 176 aa12.79□□□□□ -0.36
NFIX-210ENST00000588228 IL17RELQ6ZVW7 336 aa12.79□□□□□ -0.36
NFIX-210ENST00000588228 FAM24BQ8N5W8 94 aa12.79□□□□□ -0.36
NFIX-210ENST00000588228 TMEM86BQ8N661 226 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms