RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 MCRIP2Q9BUT9 160 aaKnown RBP13.18□□□□□ -0.3
RANBP3-209ENST00000587411 GTF2H5Q6ZYL4 71 aa13.17□□□□□ -0.3
RANBP3-209ENST00000587411 TMEM186Q96B77 213 aa13.17□□□□□ -0.3
RANBP3-209ENST00000587411 DSCAMO60469 2012 aa13.17□□□□□ -0.3
RANBP3-209ENST00000587411 FRYQ5TBA9 3013 aa13.17□□□□□ -0.3
RANBP3-209ENST00000587411 GAGE10A6NGK3 116 aa13.17□□□□□ -0.3
RANBP3-209ENST00000587411 CSN3P07498 182 aa13.17□□□□□ -0.3
RANBP3-209ENST00000587411 FAM87AP0C7U9 286 aa13.17□□□□□ -0.3
RANBP3-209ENST00000587411 FA2HQ7L5A8 372 aa13.17□□□□□ -0.3
RANBP3-209ENST00000587411 TMEM116Q8NCL8 245 aa13.17□□□□□ -0.3
RANBP3-209ENST00000587411 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
RANBP3-209ENST00000587411 VPS13AQ96RL7 3174 aa13.16□□□□□ -0.3
RANBP3-209ENST00000587411 A6NDN8 102 aa13.16□□□□□ -0.3
RANBP3-209ENST00000587411 HOXB4P17483 251 aaPredicted RBP13.16□□□□□ -0.3
RANBP3-209ENST00000587411 C8orf31Q8N9H6 132 aa13.16□□□□□ -0.3
RANBP3-209ENST00000587411 OR1N2Q8NGR9 330 aa13.16□□□□□ -0.3
RANBP3-209ENST00000587411 TMEM14CQ9P0S9 112 aa13.16□□□□□ -0.3
RANBP3-209ENST00000587411 OVOL3O00110 214 aa13.16□□□□□ -0.3
RANBP3-209ENST00000587411 CIARTQ8N365 385 aaPredicted RBP13.16□□□□□ -0.3
RANBP3-209ENST00000587411 AP1S3Q96PC3 154 aa13.16□□□□□ -0.3
RANBP3-209ENST00000587411 HIGD1AQ9Y241 93 aa13.16□□□□□ -0.3
RANBP3-209ENST00000587411 PRSS47A8MTI9 375 aa13.15□□□□□ -0.3
RANBP3-209ENST00000587411 H3BRM9 83 aa13.15□□□□□ -0.3
RANBP3-209ENST00000587411 UFSP1Q6NVU6 142 aa13.15□□□□□ -0.3
RANBP3-209ENST00000587411 LINC00311Q8N616 119 aa13.15□□□□□ -0.3
RANBP3-209ENST00000587411 PRSS3P2Q8NHM4 247 aa13.15□□□□□ -0.3
RANBP3-209ENST00000587411 PAX2Q02962 417 aa13.15□□□□□ -0.31
RANBP3-209ENST00000587411 Q6AWC8 147 aa13.15□□□□□ -0.31
RANBP3-209ENST00000587411 PRNTQ86SH4 94 aa13.15□□□□□ -0.31
RANBP3-209ENST00000587411 CACNA1GO43497 2377 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 TRAV17A0A0B4J275 112 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 C9orf118A6NHY6 69 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 H3BTX0 84 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 SLC25A17O43808 307 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 IGLV2-11P01706 119 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 MC5RP33032 325 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 RPRMLQ8N4K4 120 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 ARRDC1-AS1Q9H2J1 176 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 TIMM8BQ9Y5J9 83 aaPredicted RBP13.14□□□□□ -0.31
RANBP3-209ENST00000587411 PRR14LQ5THK1 2151 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 MBD3L4A6NDZ8 208 aaPredicted RBP13.14□□□□□ -0.31
RANBP3-209ENST00000587411 MBD3L3A6NE82 208 aaPredicted RBP13.14□□□□□ -0.31
RANBP3-209ENST00000587411 MBD3L5A6NJ08 208 aaPredicted RBP13.14□□□□□ -0.31
RANBP3-209ENST00000587411 PPIAL4DF5H284 164 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 FGF6P10767 208 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 CCL3L1P16619 93 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 LGALS7P47929 136 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 LHFPL4Q7Z7J7 247 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 TEX45Q8NA69 505 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 SVIPQ8NHG7 77 aa13.14□□□□□ -0.31
RANBP3-209ENST00000587411 MBD3L2Q8NHZ7 208 aaPredicted RBP13.14□□□□□ -0.31
RANBP3-209ENST00000587411 TRAV8-1A0A0A6YYK1 113 aa13.13□□□□□ -0.31
RANBP3-209ENST00000587411 ARMS2P0C7Q2 107 aa13.13□□□□□ -0.31
RANBP3-209ENST00000587411 HCP5Q6MZN7 132 aa13.13□□□□□ -0.31
RANBP3-209ENST00000587411 GOLT1AQ6ZVE7 132 aa13.13□□□□□ -0.31
RANBP3-209ENST00000587411 MEGF9Q9H1U4 602 aa13.13□□□□□ -0.31
RANBP3-209ENST00000587411 CD59P13987 128 aa13.13□□□□□ -0.31
RANBP3-209ENST00000587411 RUSC1-AS1Q66K80 236 aa13.13□□□□□ -0.31
RANBP3-209ENST00000587411 FER1L6-AS1Q8NA97 138 aa13.13□□□□□ -0.31
RANBP3-209ENST00000587411 SRSF12Q8WXF0 261 aaKnown RBP13.13□□□□□ -0.31
RANBP3-209ENST00000587411 RAI1Q7Z5J4 1906 aaPredicted RBP13.12□□□□□ -0.31
RANBP3-209ENST00000587411 CCL11P51671 97 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 TMEM200BQ69YZ2 307 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 TPSG1Q9NRR2 321 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 NCR2O95944 276 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 MRGPRG-AS1Q2M3A8 158 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 LGALS9BQ3B8N2 356 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 HES3Q5TGS1 186 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 LGALS9CQ6DKI2 356 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 IGFL2Q6UWQ7 119 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 DHRS13Q6UX07 377 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 TMEM75Q8N9X5 138 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 FDCSPQ8NFU4 85 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 OR9G4Q8NGQ1 327 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 HEATR1Q9H583 2144 aaKnown RBP13.12□□□□□ -0.31
RANBP3-209ENST00000587411 DMDP11532 3685 aa13.12□□□□□ -0.31
RANBP3-209ENST00000587411 SIVA1O15304 175 aa13.11□□□□□ -0.31
RANBP3-209ENST00000587411 RPL27AP46776 148 aaKnown RBP13.11□□□□□ -0.31
RANBP3-209ENST00000587411 HSD52Q0P140 79 aa13.11□□□□□ -0.31
RANBP3-209ENST00000587411 DIAPH2-AS1Q14236 149 aa13.11□□□□□ -0.31
RANBP3-209ENST00000587411 SEM1Q6ZVN7 128 aa13.11□□□□□ -0.31
RANBP3-209ENST00000587411 K7EP34 96 aa13.11□□□□□ -0.31
RANBP3-209ENST00000587411 ZNF474Q6S9Z5 364 aaPredicted RBP13.11□□□□□ -0.31
RANBP3-209ENST00000587411 BOD1L2Q8IYS8 172 aa13.11□□□□□ -0.31
RANBP3-209ENST00000587411 ZC2HC1AQ96GY0 325 aa13.11□□□□□ -0.31
RANBP3-209ENST00000587411 RABAC1Q9UI14 185 aa13.11□□□□□ -0.31
RANBP3-209ENST00000587411 PCNX2A6NKB5 2137 aa13.11□□□□□ -0.31
RANBP3-209ENST00000587411 DYSFO75923 2080 aa13.1□□□□□ -0.31
RANBP3-209ENST00000587411 C19orf67A6NJJ6 358 aa13.1□□□□□ -0.31
RANBP3-209ENST00000587411 K7EQM0 130 aa13.1□□□□□ -0.31
RANBP3-209ENST00000587411 SNAI2O43623 268 aa13.1□□□□□ -0.31
RANBP3-209ENST00000587411 TNFRSF1AP19438 455 aa13.1□□□□□ -0.31
RANBP3-209ENST00000587411 FOXE3Q13461 319 aa13.1□□□□□ -0.31
RANBP3-209ENST00000587411 ZNF493Q6ZR52 646 aa13.1□□□□□ -0.31
RANBP3-209ENST00000587411 APOBEC3AP31941 199 aaPredicted RBP13.1□□□□□ -0.31
RANBP3-209ENST00000587411 LYZP61626 148 aa13.1□□□□□ -0.31
RANBP3-209ENST00000587411 NHLH1Q02575 133 aa13.1□□□□□ -0.31
RANBP3-209ENST00000587411 EXOC3-AS1Q8N2X6 119 aa13.1□□□□□ -0.31
RANBP3-209ENST00000587411 SLC25A39Q9BZJ4 359 aaPredicted RBP13.1□□□□□ -0.31
RANBP3-209ENST00000587411 MUC3AQ02505 3323 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms