RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 UNQ9165/PRO28630Q6UXU0 137 aa6.29□□□□□ -1.4
SDF2-204ENST00000587338 SLC51BQ86UW2 128 aa6.29□□□□□ -1.4
SDF2-204ENST00000587338 TTC9CQ8N5M4 171 aa6.29□□□□□ -1.4
SDF2-204ENST00000587338 SCGB1C1Q8TD33 95 aa6.29□□□□□ -1.4
SDF2-204ENST00000587338 PINX1Q96BK5 328 aaKnown RBP6.29□□□□□ -1.4
SDF2-204ENST00000587338 MISP3Q96FF7 219 aa6.29□□□□□ -1.4
SDF2-204ENST00000587338 SPAG8Q99932 426 aaPredicted RBP6.29□□□□□ -1.4
SDF2-204ENST00000587338 RARRES2Q99969 163 aa6.29□□□□□ -1.4
SDF2-204ENST00000587338 C11orf68Q9H3H3 251 aaKnown RBP6.29□□□□□ -1.4
SDF2-204ENST00000587338 MAP6D1Q9H9H5 199 aa6.29□□□□□ -1.4
SDF2-204ENST00000587338 APLNQ9ULZ1 77 aa6.29□□□□□ -1.4
SDF2-204ENST00000587338 HSPG2P98160 4391 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 IGHV3-35A0A0C4DH35 117 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 UBE2L5PA0A1B0GUS4 154 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 A0A1B0GW64 132 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 IGLC7A0M8Q6 106 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 TEX22C9J3V5 150 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 DFFBO76075 338 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 RNASE2P10153 161 aaKnown RBP6.28□□□□□ -1.4
SDF2-204ENST00000587338 TPT1P13693 172 aaKnown RBP6.28□□□□□ -1.4
SDF2-204ENST00000587338 MFAP2P55001 183 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 EIF5AP63241 154 aaKnown RBP6.28□□□□□ -1.4
SDF2-204ENST00000587338 WT1-ASQ06250 92 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 ZNF266Q14584 549 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 ATP6V1FQ16864 119 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 C2orf83Q53S99 150 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 RPL7L1Q6DKI1 246 aaKnown RBP6.28□□□□□ -1.4
SDF2-204ENST00000587338 HSD17B13Q7Z5P4 300 aaPredicted RBP6.28□□□□□ -1.4
SDF2-204ENST00000587338 ZNF575Q86XF7 245 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 OR11H2Q8NH07 326 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 ST8SIA2Q92186 375 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 MARC2Q969Z3 335 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 EEF1AKMT3Q96AZ1 226 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 ATP5SQ99766 215 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 WFDC1Q9HC57 220 aa6.28□□□□□ -1.4
SDF2-204ENST00000587338 IGHV3-21A0A0B4J1V1 117 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 PMS2P5A8MQ11 134 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 M0R2N4 97 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 RTL8CO15255 209 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 C8orf88P0DMB2 117 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 OPRK1P41145 380 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 ATP5IP56385 69 aaPredicted RBP6.27□□□□□ -1.41
SDF2-204ENST00000587338 AKR1C1Q04828 323 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 HSD17B11Q8NBQ5 300 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 TMEM170AQ8WVE7 144 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 SRSF8Q9BRL6 282 aaKnown RBP6.27□□□□□ -1.41
SDF2-204ENST00000587338 TMEM147Q9BVK8 224 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 CYTL1Q9NRR1 136 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 UQCC1Q9NVA1 299 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 MRPL27Q9P0M9 148 aaKnown RBP6.27□□□□□ -1.41
SDF2-204ENST00000587338 UFC1Q9Y3C8 167 aa6.27□□□□□ -1.41
SDF2-204ENST00000587338 OR4C46A6NHA9 309 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 C11orf94C9JXX5 98 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 INS-IGF2F8WCM5 200 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 TSPAN4O14817 238 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 CYB5BO43169 146 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 IGHV3-48P01763 117 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 CLEC3BP05452 202 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 FGF7P21781 194 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 MLANAQ16655 118 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 ALKAL2Q6UX46 152 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 APRG1Q8IVJ8 170 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 RNASEH2CQ8TDP1 164 aaKnown RBP6.26□□□□□ -1.41
SDF2-204ENST00000587338 ACY3Q96HD9 319 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 SLC35E1Q96K37 410 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 CSTL1Q9H114 145 aa6.26□□□□□ -1.41
SDF2-204ENST00000587338 F11RQ9Y624 299 aaKnown RBP6.26□□□□□ -1.41
SDF2-204ENST00000587338 IGHV4-4A0A075B6R2 117 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 TRBV7-1A0A0A6YYK4 115 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 RPS10-NUDT3A0A1W2PQS6 291 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 MFSD2BA6NFX1 497 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 NPIPB5A8MRT5 1133 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 CORTO00230 105 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 CFDP00746 253 aaPredicted RBP6.25□□□□□ -1.41
SDF2-204ENST00000587338 IFNA7P01567 189 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 GPR183P32249 361 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 DLK1P80370 383 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 IFITM2Q01629 132 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 ZNF124Q15973 351 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 BSXQ3C1V8 233 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 ETFRF1Q6IPR1 90 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 TEX261Q6UWH6 196 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 BAP18Q8IXM2 172 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 ZNF709Q8N972 641 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 UBAC2Q8NBM4 344 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 ZNF114Q8NC26 417 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 OR1P1Q8NH06 330 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 TMED6Q8WW62 240 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 GGACTQ9BVM4 153 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 SLC25A32Q9H2D1 315 aa6.25□□□□□ -1.41
SDF2-204ENST00000587338 DMBT1Q9UGM3 2413 aaPredicted RBP6.25□□□□□ -1.41
SDF2-204ENST00000587338 MT-CO2P00403 227 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 CA1P00915 261 aaPredicted RBP6.24□□□□□ -1.41
SDF2-204ENST00000587338 CRYGCP07315 174 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 ATP6V0CP27449 155 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 GPX4P36969 197 aaPredicted RBP6.24□□□□□ -1.41
SDF2-204ENST00000587338 ELLP55199 621 aaPredicted RBP6.24□□□□□ -1.41
SDF2-204ENST00000587338 RAB31Q13636 194 aa6.24□□□□□ -1.41
SDF2-204ENST00000587338 EIF5AL1Q6IS14 154 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms