RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 TXN2Q99757 166 aa15.91■□□□□ 0.14
ATG4D-204ENST00000586417 NIPSNAP3BQ9BS92 247 aa15.91■□□□□ 0.14
ATG4D-204ENST00000586417 PDE6DO43924 150 aa15.9■□□□□ 0.14
ATG4D-204ENST00000586417 OR10J4P0C629 311 aa15.9■□□□□ 0.14
ATG4D-204ENST00000586417 NECAP1Q8NC96 275 aa15.9■□□□□ 0.14
ATG4D-204ENST00000586417 OR51G1Q8NGK1 321 aa15.9■□□□□ 0.14
ATG4D-204ENST00000586417 ZNF418Q8TF45 676 aaPredicted RBP15.9■□□□□ 0.14
ATG4D-204ENST00000586417 MRPL27Q9P0M9 148 aaKnown RBP15.9■□□□□ 0.14
ATG4D-204ENST00000586417 M0R036 132 aa15.9■□□□□ 0.14
ATG4D-204ENST00000586417 TMEM86BQ8N661 226 aa15.9■□□□□ 0.14
ATG4D-204ENST00000586417 ZNF491Q8N8L2 437 aa15.9■□□□□ 0.14
ATG4D-204ENST00000586417 HIGD1AQ9Y241 93 aa15.9■□□□□ 0.14
ATG4D-204ENST00000586417 WI2-2373I1.2A0A1W2PRP0 233 aa15.89■□□□□ 0.13
ATG4D-204ENST00000586417 C7orf77A4D0Y5 90 aa15.89■□□□□ 0.13
ATG4D-204ENST00000586417 CTSGP08311 255 aa15.89■□□□□ 0.13
ATG4D-204ENST00000586417 PYYP10082 97 aa15.89■□□□□ 0.13
ATG4D-204ENST00000586417 HILS1P60008 231 aa15.89■□□□□ 0.13
ATG4D-204ENST00000586417 TMEM88Q6PEY1 159 aa15.89■□□□□ 0.13
ATG4D-204ENST00000586417 CBLN2Q8IUK8 224 aa15.89■□□□□ 0.13
ATG4D-204ENST00000586417 RPUSD4Q96CM3 377 aaKnown RBP15.89■□□□□ 0.13
ATG4D-204ENST00000586417 TVP23CQ96ET8 276 aa15.89■□□□□ 0.13
ATG4D-204ENST00000586417 PAXXQ9BUH6 204 aa15.89■□□□□ 0.13
ATG4D-204ENST00000586417 PARLQ9H300 379 aa15.89■□□□□ 0.13
ATG4D-204ENST00000586417 OR2T8A6NH00 312 aa15.88■□□□□ 0.13
ATG4D-204ENST00000586417 F6UZH7 168 aa15.88■□□□□ 0.13
ATG4D-204ENST00000586417 NUPL2O15504 423 aaKnown RBP15.88■□□□□ 0.13
ATG4D-204ENST00000586417 PPIFP30405 207 aaKnown RBP15.88■□□□□ 0.13
ATG4D-204ENST00000586417 UBE2L3P68036 154 aaKnown RBP15.88■□□□□ 0.13
ATG4D-204ENST00000586417 SRSF2Q01130 221 aaKnown RBP15.88■□□□□ 0.13
ATG4D-204ENST00000586417 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.88■□□□□ 0.13
ATG4D-204ENST00000586417 MS4A10Q96PG2 267 aa15.88■□□□□ 0.13
ATG4D-204ENST00000586417 OR51M1Q9H341 326 aa15.88■□□□□ 0.13
ATG4D-204ENST00000586417 ZNF727A8MUV8 499 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 OR2C1O95371 312 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 ADMP35318 185 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 AKR1C3P42330 323 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 RHEBQ15382 184 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 FXYD5Q96DB9 178 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 RNF125Q96EQ8 232 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 ZNF414Q96IQ9 312 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 CCDC140Q96MF4 163 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 NOL4LQ96MY1 436 aaPredicted RBP15.87■□□□□ 0.13
ATG4D-204ENST00000586417 SMIM7Q9BQ49 75 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 CHRDL1Q9BU40 450 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 IL4P05112 153 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 SLC25A39Q9BZJ4 359 aaPredicted RBP15.87■□□□□ 0.13
ATG4D-204ENST00000586417 SDF2L1Q9HCN8 221 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 RPS10P5Q9NQ39 176 aa15.87■□□□□ 0.13
ATG4D-204ENST00000586417 A0A1W2PRE2 83 aa15.86■□□□□ 0.13
ATG4D-204ENST00000586417 FAM181BA6NEQ2 426 aa15.86■□□□□ 0.13
ATG4D-204ENST00000586417 CLDN34H7C241 214 aa15.86■□□□□ 0.13
ATG4D-204ENST00000586417 BRI3O95415 125 aa15.86■□□□□ 0.13
ATG4D-204ENST00000586417 GP9P14770 177 aa15.86■□□□□ 0.13
ATG4D-204ENST00000586417 ZNF674Q2M3X9 581 aa15.86■□□□□ 0.13
ATG4D-204ENST00000586417 LEMD1Q68G75 181 aa15.86■□□□□ 0.13
ATG4D-204ENST00000586417 STXBP6Q8NFX7 210 aa15.86■□□□□ 0.13
ATG4D-204ENST00000586417 SCO2A0A1W2PP80 73 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 GGTLC3B5MD39 225 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 AP4M1O00189 453 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 USF2Q15853 346 aaPredicted RBP15.85■□□□□ 0.13
ATG4D-204ENST00000586417 Q8WTZ3 238 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 C11orf52Q96A22 123 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 ZNF580Q9UK33 172 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 NDUFB4O95168 129 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 GPR183P32249 361 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 PNRC1Q12796 327 aaPredicted RBP15.85■□□□□ 0.13
ATG4D-204ENST00000586417 ZNF343Q6P1L6 599 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 EEF1AKMT3Q96AZ1 226 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 SHANK2-AS3Q9BTD1 123 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 DERL1Q9BUN8 251 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 NAT8Q9UHE5 227 aa15.85■□□□□ 0.13
ATG4D-204ENST00000586417 FAM223BA6NKX1 122 aa15.84■□□□□ 0.13
ATG4D-204ENST00000586417 H3BRN7 92 aa15.84■□□□□ 0.13
ATG4D-204ENST00000586417 CFHR3Q02985 330 aa15.84■□□□□ 0.13
ATG4D-204ENST00000586417 FAM223AQ8IWN6 122 aa15.84■□□□□ 0.13
ATG4D-204ENST00000586417 TRBV7-1A0A0A6YYK4 115 aa15.83■□□□□ 0.12
ATG4D-204ENST00000586417 H3BUA1 57 aa15.83■□□□□ 0.12
ATG4D-204ENST00000586417 SCGB2A1O75556 95 aa15.83■□□□□ 0.12
ATG4D-204ENST00000586417 CLEC3BP05452 202 aa15.83■□□□□ 0.12
ATG4D-204ENST00000586417 RNASE1P07998 156 aaKnown RBP15.83■□□□□ 0.12
ATG4D-204ENST00000586417 C2CD3Q4AC94 2353 aa15.83■□□□□ 0.12
ATG4D-204ENST00000586417 TCF21O43680 179 aa15.82■□□□□ 0.12
ATG4D-204ENST00000586417 TRGV3P03979 118 aa15.82■□□□□ 0.12
ATG4D-204ENST00000586417 ATP5G2Q06055 141 aa15.82■□□□□ 0.12
ATG4D-204ENST00000586417 TMEM241Q24JQ0 296 aa15.82■□□□□ 0.12
ATG4D-204ENST00000586417 TMEM14CQ9P0S9 112 aa15.82■□□□□ 0.12
ATG4D-204ENST00000586417 TMEM95Q3KNT9 176 aa15.82■□□□□ 0.12
ATG4D-204ENST00000586417 CLEC19AQ6UXS0 136 aa15.82■□□□□ 0.12
ATG4D-204ENST00000586417 ATP6V0BQ99437 205 aa15.82■□□□□ 0.12
ATG4D-204ENST00000586417 NPFFR1Q9GZQ6 430 aa15.82■□□□□ 0.12
ATG4D-204ENST00000586417 SMCO4Q9NRQ5 59 aa15.82■□□□□ 0.12
ATG4D-204ENST00000586417 GAR1Q9NY12 217 aaKnown RBP15.82■□□□□ 0.12
ATG4D-204ENST00000586417 IGLV1-40P01703 118 aa15.81■□□□□ 0.12
ATG4D-204ENST00000586417 SUMO1P63165 101 aaKnown RBP15.81■□□□□ 0.12
ATG4D-204ENST00000586417 JMJD8Q96S16 334 aa15.81■□□□□ 0.12
ATG4D-204ENST00000586417 ZNF702PQ9H963 129 aa15.81■□□□□ 0.12
ATG4D-204ENST00000586417 A0A087WWC5 75 aa15.8■□□□□ 0.12
ATG4D-204ENST00000586417 TGOLN2O43493 480 aa15.8■□□□□ 0.12
ATG4D-204ENST00000586417 SNRPCP09234 159 aaKnown RBP15.8■□□□□ 0.12
ATG4D-204ENST00000586417 RPL23P62829 140 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms