RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, human

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-222	ENST00000585867	GNG13	Q9P2W3	67 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	HIGD1A	Q9Y241	93 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	HMGB3	O15347	200 aa	Known RBP	13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	CTSG	P08311	255 aa		13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	C8orf88	P0DMB2	117 aa		13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	PSMB8	P28062	276 aa		13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	LYZ	P61626	148 aa		13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	REL	Q04864	619 aa	Predicted RBP	13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	TCTEX1D4	Q5JR98	221 aa		13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	ZNF600	Q6ZNG1	722 aa		13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	LCNL1	Q6ZST4	164 aa		13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	IQCF2	Q8IXL9	164 aa		13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	CCDC140	Q96MF4	163 aa		13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	KLK15	Q9H2R5	256 aa		13.8	□□□□□ -0.2
RBFOX1-222	ENST00000585867	KRBOX1	C9JBD0	128 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	TGOLN2	O43493	480 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	CLEC3B	P05452	202 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	CD5	P06127	495 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	ARL14EPL	P0DKL9	152 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	RAB9A	P51151	201 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	ZNF506	Q5JVG8	444 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	HIST2H2BD	Q6DRA6	164 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	CLEC19A	Q6UXS0	136 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	PATE2	Q6UY27	113 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	MIR17HG	Q75NE6	70 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	LINC00305	Q7Z4B0	112 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	C3orf56	Q8N813	242 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	STXBP6	Q8NFX7	210 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	RNF125	Q96EQ8	232 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	NARS2	Q96I59	477 aa	Known RBP	13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	RNF24	Q9Y225	148 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	ANKRD34B	A5PLL1	514 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	BCL2	P10415	239 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	KRTAP21-3	Q3LHN1	58 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	SPATA31B1P	Q5VZV4	182 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	ZNF747	Q9BV97	191 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	TMEM167B	Q9NRX6	74 aa		13.79	□□□□□ -0.2
RBFOX1-222	ENST00000585867	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	LOC102723971	A0A1B0GUV8	181 aa		13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	IL4	P05112	153 aa		13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	RPLP1	P05386	114 aa	Known RBP	13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	GCHFR	P30047	84 aa		13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	HAGH	Q16775	308 aa		13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	ZNF491	Q8N8L2	437 aa		13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	RNF152	Q8N8N0	203 aa		13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	GNB4	Q9HAV0	340 aa		13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	MRPL27	Q9P0M9	148 aa	Known RBP	13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	VAX2	Q9UIW0	290 aa		13.78	□□□□□ -0.2
RBFOX1-222	ENST00000585867	BMPR1B	O00238	502 aa		13.77	□□□□□ -0.21
RBFOX1-222	ENST00000585867	OR7C2	O60412	319 aa		13.77	□□□□□ -0.21
RBFOX1-222	ENST00000585867	HSPB1	P04792	205 aa	Known RBP	13.77	□□□□□ -0.21
RBFOX1-222	ENST00000585867	ZP3	P21754	424 aa		13.77	□□□□□ -0.21
RBFOX1-222	ENST00000585867	CITED2	Q99967	270 aa	Predicted RBP	13.77	□□□□□ -0.21
RBFOX1-222	ENST00000585867	SCRT1	Q9BWW7	348 aa		13.77	□□□□□ -0.21
RBFOX1-222	ENST00000585867	NDUFS6	O75380	124 aa	Known RBP	13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	EIF3G	O75821	320 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	ADM	P35318	185 aa		13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	ARL3	P36405	182 aa		13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	KHDC1L	Q5JSQ8	128 aa		13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	ZNF343	Q6P1L6	599 aa		13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	UHRF2	Q96PU4	802 aa		13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	CITED1	Q99966	193 aa		13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	TXNDC17	Q9BRA2	123 aa		13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	CHRDL1	Q9BU40	450 aa		13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	TMEM231	Q9H6L2	316 aa		13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	ARL2-SNX15	V9GYD0	113 aa		13.76	□□□□□ -0.21
RBFOX1-222	ENST00000585867	TMEM218	A2RU14	115 aa		13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	SRSF3	P84103	164 aa	Known RBP	13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	KIAA0141	Q14154	515 aa	Predicted RBP	13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	ICAM4	Q14773	271 aa		13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	SLC25A2	Q9BXI2	301 aa		13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	TMPRSS5	Q9H3S3	457 aa		13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	MYOZ3	Q8TDC0	251 aa		13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	RARRES2	Q99969	163 aa		13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	RABAC1	Q9UI14	185 aa		13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.75	□□□□□ -0.21
RBFOX1-222	ENST00000585867		H3BRN7	92 aa		13.74	□□□□□ -0.21
RBFOX1-222	ENST00000585867	MEF2B	Q02080	365 aa	Predicted RBP	13.74	□□□□□ -0.21
RBFOX1-222	ENST00000585867	RXFP4	Q8TDU9	374 aa		13.74	□□□□□ -0.21
RBFOX1-222	ENST00000585867	FAM167A-AS1	Q96KT0	104 aa		13.74	□□□□□ -0.21
RBFOX1-222	ENST00000585867	UBE2E2	Q96LR5	201 aa		13.74	□□□□□ -0.21
RBFOX1-222	ENST00000585867	SHANK2-AS3	Q9BTD1	123 aa		13.74	□□□□□ -0.21
RBFOX1-222	ENST00000585867	PAXX	Q9BUH6	204 aa		13.74	□□□□□ -0.21
RBFOX1-222	ENST00000585867	SLC35B3	Q9H1N7	401 aa		13.74	□□□□□ -0.21
RBFOX1-222	ENST00000585867	OR51M1	Q9H341	326 aa		13.74	□□□□□ -0.21
RBFOX1-222	ENST00000585867	SFTA3	P0C7M3	94 aa		13.73	□□□□□ -0.21
RBFOX1-222	ENST00000585867	CDX1	P47902	265 aa	Predicted RBP	13.73	□□□□□ -0.21
RBFOX1-222	ENST00000585867	UBE2L3	P68036	154 aa	Known RBP	13.73	□□□□□ -0.21
RBFOX1-222	ENST00000585867	MORN5	Q5VZ52	161 aa		13.73	□□□□□ -0.21
RBFOX1-222	ENST00000585867	SHISA2	Q6UWI4	295 aa		13.73	□□□□□ -0.21
RBFOX1-222	ENST00000585867	SUN5	Q8TC36	379 aa		13.73	□□□□□ -0.21
RBFOX1-222	ENST00000585867	COL6A5	A8TX70	2615 aa		13.73	□□□□□ -0.21
RBFOX1-222	ENST00000585867	TRAV5	A0A0B4J249	113 aa		13.72	□□□□□ -0.21
RBFOX1-222	ENST00000585867		A0A1W2PRX2	142 aa		13.72	□□□□□ -0.21
RBFOX1-222	ENST00000585867	PAGE4	O60829	102 aa		13.72	□□□□□ -0.21
RBFOX1-222	ENST00000585867	IGHV3-11	P01762	117 aa		13.72	□□□□□ -0.21
RBFOX1-222	ENST00000585867	USF2	Q15853	346 aa	Predicted RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms