RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 PBDC1Q9BVG4 233 aa12.51□□□□□ -0.41
ITGB4-213ENST00000584939 C11orf68Q9H3H3 251 aaKnown RBP12.51□□□□□ -0.41
ITGB4-213ENST00000584939 PAIP2BQ9ULR5 123 aaKnown RBP12.51□□□□□ -0.41
ITGB4-213ENST00000584939 INMT-MINDY4F8WBC2 141 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 K7EPK0 472 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 DEFB4AO15263 64 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 SPP1P10451 314 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 TAS2R30P59541 319 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 RPP30P78346 268 aaKnown RBP12.5□□□□□ -0.41
ITGB4-213ENST00000584939 ARL16Q0P5N6 197 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 SIGLEC15Q6ZMC9 328 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 TMEM182Q6ZP80 229 aaPredicted RBP12.5□□□□□ -0.41
ITGB4-213ENST00000584939 ACOT7LQ6ZUV0 252 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 C2orf50Q96LR7 162 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 RAB40CQ96S21 281 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 TRGV9Q99603 122 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 NRN1Q9NPD7 142 aa12.5□□□□□ -0.41
ITGB4-213ENST00000584939 DNAH1Q9P2D7 4330 aa12.49□□□□□ -0.41
ITGB4-213ENST00000584939 TSC22D2O75157 780 aa12.49□□□□□ -0.41
ITGB4-213ENST00000584939 LY6G6CO95867 125 aa12.49□□□□□ -0.41
ITGB4-213ENST00000584939 NANOS2P60321 138 aaKnown RBP12.49□□□□□ -0.41
ITGB4-213ENST00000584939 SNRPD3P62318 126 aaKnown RBP12.49□□□□□ -0.41
ITGB4-213ENST00000584939 TMEM41BQ5BJD5 291 aa12.49□□□□□ -0.41
ITGB4-213ENST00000584939 C11orf45Q8TAV5 145 aa12.49□□□□□ -0.41
ITGB4-213ENST00000584939 PFDN2Q9UHV9 154 aa12.49□□□□□ -0.41
ITGB4-213ENST00000584939 C5orf51A6NDU8 294 aa12.48□□□□□ -0.41
ITGB4-213ENST00000584939 SNRPGP15A8MWD9 76 aa12.48□□□□□ -0.41
ITGB4-213ENST00000584939 FAM25EA8MYX2 175 aa12.48□□□□□ -0.41
ITGB4-213ENST00000584939 FABP1P07148 127 aa12.48□□□□□ -0.41
ITGB4-213ENST00000584939 METTL15P1P0C7V9 234 aa12.48□□□□□ -0.41
ITGB4-213ENST00000584939 C4BPBP20851 252 aa12.48□□□□□ -0.41
ITGB4-213ENST00000584939 NUP62P37198 522 aaPredicted RBP12.48□□□□□ -0.41
ITGB4-213ENST00000584939 OR8G2PQ6IF36 304 aa12.48□□□□□ -0.41
ITGB4-213ENST00000584939 MFFQ9GZY8 342 aa12.48□□□□□ -0.41
ITGB4-213ENST00000584939 FBXL17Q9UF56 701 aa12.48□□□□□ -0.41
ITGB4-213ENST00000584939 HYDINQ4G0P3 5121 aa12.47□□□□□ -0.41
ITGB4-213ENST00000584939 PRAF2O60831 178 aa12.47□□□□□ -0.41
ITGB4-213ENST00000584939 SIX6O95475 246 aa12.47□□□□□ -0.41
ITGB4-213ENST00000584939 LYZP61626 148 aa12.47□□□□□ -0.41
ITGB4-213ENST00000584939 OR2F1Q13607 317 aa12.47□□□□□ -0.41
ITGB4-213ENST00000584939 TMEM144Q7Z5S9 345 aa12.47□□□□□ -0.41
ITGB4-213ENST00000584939 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
ITGB4-213ENST00000584939 GATA2P23769 480 aaPredicted RBP12.46□□□□□ -0.41
ITGB4-213ENST00000584939 DEFA1P59665 94 aa12.46□□□□□ -0.41
ITGB4-213ENST00000584939 DEFA3P59666 94 aa12.46□□□□□ -0.41
ITGB4-213ENST00000584939 DLK1P80370 383 aa12.46□□□□□ -0.41
ITGB4-213ENST00000584939 RAB32Q13637 225 aa12.46□□□□□ -0.41
ITGB4-213ENST00000584939 GSG1LQ6UXU4 331 aa12.46□□□□□ -0.41
ITGB4-213ENST00000584939 Q8NAQ8 132 aa12.46□□□□□ -0.41
ITGB4-213ENST00000584939 CLEC5AQ9NY25 188 aa12.46□□□□□ -0.41
ITGB4-213ENST00000584939 LSM5Q9Y4Y9 91 aaKnown RBP12.46□□□□□ -0.41
ITGB4-213ENST00000584939 GPN1Q9HCN4 374 aaPredicted RBP12.45□□□□□ -0.42
ITGB4-213ENST00000584939 IGHV4-28A0A0C4DH34 117 aa12.44□□□□□ -0.42
ITGB4-213ENST00000584939 FNDC10F2Z333 226 aa12.44□□□□□ -0.42
ITGB4-213ENST00000584939 H3BMM0 161 aa12.44□□□□□ -0.42
ITGB4-213ENST00000584939 RBMY1A1P0DJD3 496 aaKnown RBP12.44□□□□□ -0.42
ITGB4-213ENST00000584939 RBMY1CP0DJD4 496 aa12.44□□□□□ -0.42
ITGB4-213ENST00000584939 MIFP14174 115 aa12.44□□□□□ -0.42
ITGB4-213ENST00000584939 H2BFSP57053 126 aa12.44□□□□□ -0.42
ITGB4-213ENST00000584939 RRAS2P62070 204 aaPredicted RBP12.44□□□□□ -0.42
ITGB4-213ENST00000584939 RBMY1FQ15415 496 aaKnown RBP12.44□□□□□ -0.42
ITGB4-213ENST00000584939 C1orf194Q5T5A4 169 aa12.44□□□□□ -0.42
ITGB4-213ENST00000584939 CSNK1G2-AS1Q8NCQ2 148 aa12.44□□□□□ -0.42
ITGB4-213ENST00000584939 PPP1R14BQ96C90 147 aa12.44□□□□□ -0.42
ITGB4-213ENST00000584939 X6R8D5 127 aa12.44□□□□□ -0.42
ITGB4-213ENST00000584939 FAM24AA6NFZ4 105 aa12.43□□□□□ -0.42
ITGB4-213ENST00000584939 ZNF705EA8MWA4 302 aaPredicted RBP12.43□□□□□ -0.42
ITGB4-213ENST00000584939 GOSR2O14653 212 aa12.43□□□□□ -0.42
ITGB4-213ENST00000584939 NUTF2P61970 127 aaKnown RBP12.43□□□□□ -0.42
ITGB4-213ENST00000584939 OR10P1Q8NGE3 313 aa12.43□□□□□ -0.42
ITGB4-213ENST00000584939 LINC00052Q96N35 136 aa12.43□□□□□ -0.42
ITGB4-213ENST00000584939 ALMS1Q8TCU4 4167 aa12.43□□□□□ -0.42
ITGB4-213ENST00000584939 PLECQ15149 4684 aaKnown RBP12.43□□□□□ -0.42
ITGB4-213ENST00000584939 IGSF23A1L1A6 192 aa12.42□□□□□ -0.42
ITGB4-213ENST00000584939 H0YIZ8 118 aa12.42□□□□□ -0.42
ITGB4-213ENST00000584939 CFDP00746 253 aaPredicted RBP12.42□□□□□ -0.42
ITGB4-213ENST00000584939 ID1P41134 155 aa12.42□□□□□ -0.42
ITGB4-213ENST00000584939 AKR1C1Q04828 323 aa12.42□□□□□ -0.42
ITGB4-213ENST00000584939 OR8I2Q8N0Y5 310 aa12.42□□□□□ -0.42
ITGB4-213ENST00000584939 C17orf77Q96MU5 243 aa12.42□□□□□ -0.42
ITGB4-213ENST00000584939 C1QTNF4Q9BXJ3 329 aa12.42□□□□□ -0.42
ITGB4-213ENST00000584939 HRH4Q9H3N8 390 aa12.42□□□□□ -0.42
ITGB4-213ENST00000584939 DEDDO75618 318 aa12.41□□□□□ -0.42
ITGB4-213ENST00000584939 HLA-DRB4P13762 266 aa12.41□□□□□ -0.42
ITGB4-213ENST00000584939 CYP2G1PQ6ZSU1 146 aa12.41□□□□□ -0.42
ITGB4-213ENST00000584939 NMES1Q9C002 83 aa12.41□□□□□ -0.42
ITGB4-213ENST00000584939 NPVFQ9HCQ7 196 aa12.41□□□□□ -0.42
ITGB4-213ENST00000584939 LYRM2Q9NU23 88 aaPredicted RBP12.41□□□□□ -0.42
ITGB4-213ENST00000584939 XCL2Q9UBD3 114 aa12.41□□□□□ -0.42
ITGB4-213ENST00000584939 HLA-DRB4X5D2U9 266 aa12.41□□□□□ -0.42
ITGB4-213ENST00000584939 ELOA3CA0A087WX78 387 aaPredicted RBP12.4□□□□□ -0.42
ITGB4-213ENST00000584939 SMCO3A2RU48 225 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 L7N2F9 121 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 SOCS3O14543 225 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 CST7O76096 145 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 PTTG1O95997 202 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 PSMB3P49720 205 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 DEFB1P60022 68 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 PLP1P60201 277 aa12.4□□□□□ -0.42
ITGB4-213ENST00000584939 S100A10P60903 97 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms