RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 MRPL27Q9P0M9 148 aaKnown RBP11.29□□□□□ -0.6
SENP3-208ENST00000583277 A0A1B0GV50 99 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 C8orf88P0DMB2 117 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 PROK1P58294 105 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 USF2Q15853 346 aaPredicted RBP11.28□□□□□ -0.6
SENP3-208ENST00000583277 KHDC1LQ5JSQ8 128 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 SPATA31B1PQ5VZV4 182 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 TOMM20LQ6UXN7 152 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 PQLC2Q6ZP29 291 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 COMMD7Q86VX2 200 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 STXBP6Q8NFX7 210 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 C4orf3Q8WVX3 66 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 MARC2Q969Z3 335 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 UHRF2Q96PU4 802 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 OR5B12Q96R08 314 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
SENP3-208ENST00000583277 RABAC1Q9UI14 185 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 IGHV3-35A0A0C4DH35 117 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 HMGB3O15347 200 aaKnown RBP11.28□□□□□ -0.6
SENP3-208ENST00000583277 ARL14EPLP0DKL9 152 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 PPT1P50897 306 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 FGF8P55075 233 aaPredicted RBP11.28□□□□□ -0.6
SENP3-208ENST00000583277 TCTEX1D4Q5JR98 221 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 ZNF414Q96IQ9 312 aa11.28□□□□□ -0.6
SENP3-208ENST00000583277 RAB19A4D1S5 217 aa11.27□□□□□ -0.61
SENP3-208ENST00000583277 H3BRN7 92 aa11.27□□□□□ -0.61
SENP3-208ENST00000583277 IFNA1P01562 189 aa11.27□□□□□ -0.61
SENP3-208ENST00000583277 PSMB3P49720 205 aa11.27□□□□□ -0.61
SENP3-208ENST00000583277 PMS2P11Q13670 270 aa11.27□□□□□ -0.61
SENP3-208ENST00000583277 METTL26Q96S19 204 aa11.27□□□□□ -0.61
SENP3-208ENST00000583277 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.61
SENP3-208ENST00000583277 I3L521 148 aa11.26□□□□□ -0.61
SENP3-208ENST00000583277 HAX1O00165 279 aa11.26□□□□□ -0.61
SENP3-208ENST00000583277 OR7C2O60412 319 aa11.26□□□□□ -0.61
SENP3-208ENST00000583277 EIF3GO75821 320 aaKnown RBP eCLIP11.26□□□□□ -0.61
SENP3-208ENST00000583277 HSPB1P04792 205 aaKnown RBP11.26□□□□□ -0.61
SENP3-208ENST00000583277 GPHB5Q86YW7 130 aa11.26□□□□□ -0.61
SENP3-208ENST00000583277 IQCF2Q8IXL9 164 aa11.26□□□□□ -0.61
SENP3-208ENST00000583277 TMEM190Q8WZ59 177 aa11.26□□□□□ -0.61
SENP3-208ENST00000583277 FAM167A-AS1Q96KT0 104 aa11.26□□□□□ -0.61
SENP3-208ENST00000583277 SLC25A2Q9BXI2 301 aa11.26□□□□□ -0.61
SENP3-208ENST00000583277 MANBALQ9NQG1 85 aa11.26□□□□□ -0.61
SENP3-208ENST00000583277 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
SENP3-208ENST00000583277 ZP3P21754 424 aa11.25□□□□□ -0.61
SENP3-208ENST00000583277 GCHFRP30047 84 aa11.25□□□□□ -0.61
SENP3-208ENST00000583277 TAGLN2P37802 199 aaKnown RBP11.25□□□□□ -0.61
SENP3-208ENST00000583277 SRSF2Q01130 221 aaKnown RBP11.25□□□□□ -0.61
SENP3-208ENST00000583277 RPEL1Q2QD12 228 aa11.25□□□□□ -0.61
SENP3-208ENST00000583277 FAM106AQ4KMX7 169 aa11.25□□□□□ -0.61
SENP3-208ENST00000583277 MORN5Q5VZ52 161 aa11.25□□□□□ -0.61
SENP3-208ENST00000583277 KLHL30-AS1Q8NEE0 82 aa11.25□□□□□ -0.61
SENP3-208ENST00000583277 FAM210AQ96ND0 272 aa11.25□□□□□ -0.61
SENP3-208ENST00000583277 C20orf24Q9BUV8 137 aa11.25□□□□□ -0.61
SENP3-208ENST00000583277 SCRT1Q9BWW7 348 aa11.25□□□□□ -0.61
SENP3-208ENST00000583277 TSSC4Q9Y5U2 329 aaPredicted RBP11.25□□□□□ -0.61
SENP3-208ENST00000583277 CD28P10747 220 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 CCL20P78556 96 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 FOXL1Q12952 345 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 UQCC3Q6UW78 93 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 SLC7A5P1Q8MH63 180 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 EIF4E3Q8N5X7 224 aaKnown RBP11.24□□□□□ -0.61
SENP3-208ENST00000583277 NARS2Q96I59 477 aaKnown RBP11.24□□□□□ -0.61
SENP3-208ENST00000583277 PAXXQ9BUH6 204 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 GNG13Q9P2W3 67 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 IGHV4OR15-8A0A075B7B6 117 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 A0A087WW49 117 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 TRAV5A0A0B4J249 113 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 ZNF98A6NK75 572 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 NPPCP23582 126 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 UBE2L3P68036 154 aaKnown RBP11.24□□□□□ -0.61
SENP3-208ENST00000583277 OR51M1Q9H341 326 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 ARL2-SNX15V9GYD0 113 aa11.24□□□□□ -0.61
SENP3-208ENST00000583277 ATRQ13535 2644 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 IGHV3OR16-8A0A075B7F1 116 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 LINC01619G3V211 115 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 BCL2P10415 239 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 CRYBB3P26998 211 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 GUK1Q16774 197 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 TOR2AQ5JU69 321 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 C1orf194Q5T5A4 169 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 UNQ9165/PRO28630Q6UXU0 137 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 REC114Q7Z4M0 266 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 BPIFA4PQ86YQ2 179 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
SENP3-208ENST00000583277 ZNF503Q96F45 646 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 CITED2Q99967 270 aaPredicted RBP11.23□□□□□ -0.61
SENP3-208ENST00000583277 TMPRSS5Q9H3S3 457 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 DAZ1Q9NQZ3 744 aaKnown RBP11.23□□□□□ -0.61
SENP3-208ENST00000583277 UFC1Q9Y3C8 167 aa11.23□□□□□ -0.61
SENP3-208ENST00000583277 ZNF320A2RRD8 509 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 RBFOX3A6NFN3 312 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 K7EMT4 169 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 LGALS9O00182 355 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 GP9P14770 177 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 RPL7P18124 248 aaKnown RBP11.22□□□□□ -0.61
SENP3-208ENST00000583277 HOXD3P31249 432 aaPredicted RBP11.22□□□□□ -0.61
SENP3-208ENST00000583277 PEA15Q15121 130 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 LEMD1Q68G75 181 aa11.22□□□□□ -0.61
SENP3-208ENST00000583277 C18orf65Q6ZTR6 163 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms