RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TIRAPP58753 221 aa5.16□□□□□ -1.58
SMARCE1-217ENST00000580654 FXYD4P59646 89 aa5.16□□□□□ -1.58
SMARCE1-217ENST00000580654 IL18Q14116 193 aa5.16□□□□□ -1.58
SMARCE1-217ENST00000580654 SPINK9Q5DT21 86 aa5.16□□□□□ -1.58
SMARCE1-217ENST00000580654 NFE4Q86UQ8 179 aa5.16□□□□□ -1.58
SMARCE1-217ENST00000580654 ZNF555Q8NEP9 628 aa5.16□□□□□ -1.58
SMARCE1-217ENST00000580654 OR4X1Q8NH49 305 aa5.16□□□□□ -1.58
SMARCE1-217ENST00000580654 TMEM203Q969S6 136 aa5.16□□□□□ -1.58
SMARCE1-217ENST00000580654 FKBP11Q9NYL4 201 aa5.16□□□□□ -1.58
SMARCE1-217ENST00000580654 MBD2Q9UBB5 411 aa5.16□□□□□ -1.58
SMARCE1-217ENST00000580654 H3BNG1 76 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 ATP5HO75947 161 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 C1QBP02746 253 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 RLN1P04808 185 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 RNASE2P10153 161 aaKnown RBP5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 PSMB3P49720 205 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 CAMPP49913 170 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 OR10A3P58181 314 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 RPS25P62851 125 aaKnown RBP5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 AHSA2Q719I0 299 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 LINC00612Q8N6U2 182 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 BPIFB6Q8NFQ5 453 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 GPR146Q96CH1 333 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 VSIG2Q96IQ7 327 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 C9orf16Q9BUW7 83 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 PSORS1C1Q9UIG5 152 aa5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 LSM2Q9Y333 95 aaKnown RBP5.15□□□□□ -1.59
SMARCE1-217ENST00000580654 M0R2Z0 102 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 PGLYRP1O75594 196 aaPredicted RBP5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 NXPH4O95158 308 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 IGKV1-39P01597 117 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 IGKV1D-39P04432 117 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 IGLC1P0CG04 106 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 CDKN1BP46527 198 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 HNRNPA3P51991 378 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 HSPE1P61604 102 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 ERHP84090 104 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 DHODHQ02127 395 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 SPINK13Q1W4C9 94 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 SPATA31B1PQ5VZV4 182 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 TMEM17Q86X19 198 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 BAP18Q8IXM2 172 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 OR6F1Q8NGZ6 308 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 NTN5Q8WTR8 489 aaPredicted RBP5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 SEC22AQ96IW7 307 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 ATG5Q9H1Y0 275 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 FKBP14Q9NWM8 211 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 KLK11Q9UBX7 282 aa5.14□□□□□ -1.59
SMARCE1-217ENST00000580654 TRAV12-2A0A075B6T6 113 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 METTL21EPA6NDL7 271 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 IFITM5A6NNB3 132 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 INS-IGF2F8WCM5 200 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 INSP01308 110 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 IL4P05112 153 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 ARL6IP1Q15041 203 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 IZUMO4Q1ZYL8 232 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 ZFP1Q6P2D0 407 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 EBLN2Q6P2I7 272 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 BEST4Q8NFU0 473 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 OR11H7Q8NGC8 314 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 COQ8AQ8NI60 647 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 TSC22D3Q99576 134 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 NOP10Q9NPE3 64 aaKnown RBP5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 MSRB1Q9NZV6 116 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 DOK5Q9P104 306 aa5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 TIMM8BQ9Y5J9 83 aaPredicted RBP5.13□□□□□ -1.59
SMARCE1-217ENST00000580654 TRAV30A0A087WSZ9 112 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 CORTO00230 105 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 ARL6IP5O75915 188 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 NXPH3O95157 252 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 FCER2P06734 321 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 SNCAP37840 140 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 ID1P41134 155 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 OPRK1P41145 380 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 RPL5P46777 297 aaKnown RBP5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 PCP4P48539 62 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 GNG2P59768 71 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 ARPC4P59998 168 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 YPEL3P61236 119 aaPredicted RBP5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 SSTP61278 116 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 FABP5Q01469 135 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 KIR3DS1Q14943 382 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 SPHARQ15513 63 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 SCXQ7RTU7 201 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 TMED4Q7Z7H5 227 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 C10orf67Q8IYJ2 551 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 Q8N814 137 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 OR1S2Q8NGQ3 325 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 OR10J6PQ8NGY7 276 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 OR4A16Q8NH70 328 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 RNASE8Q8TDE3 154 aaKnown RBP5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 Q8WTZ3 238 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 CYGBQ8WWM9 190 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 C16orf74Q96GX8 76 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 PLCXD1Q9NUJ7 323 aa5.12□□□□□ -1.59
SMARCE1-217ENST00000580654 K7EQM0 130 aa5.11□□□□□ -1.59
SMARCE1-217ENST00000580654 GAS8-AS1O95177 125 aa5.11□□□□□ -1.59
SMARCE1-217ENST00000580654 RANBP1P43487 201 aa5.11□□□□□ -1.59
SMARCE1-217ENST00000580654 CNN1P51911 297 aaKnown RBP5.11□□□□□ -1.59
SMARCE1-217ENST00000580654 B2MP61769 119 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms