RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 EEF1AKMT3Q96AZ1 226 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 FAM167A-AS1Q96KT0 104 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 PAXXQ9BUH6 204 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 SLC25A2Q9BXI2 301 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 OR51M1Q9H341 326 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 S4R3C0 116 aa13.24□□□□□ -0.29
SREBF1-218ENST00000578469 TRAV5A0A0B4J249 113 aa13.23□□□□□ -0.29
SREBF1-218ENST00000578469 FAM74A7A6NL05 159 aa13.23□□□□□ -0.29
SREBF1-218ENST00000578469 ZNF727A8MUV8 499 aa13.23□□□□□ -0.29
SREBF1-218ENST00000578469 H3BUA1 57 aa13.23□□□□□ -0.29
SREBF1-218ENST00000578469 AP4M1O00189 453 aa13.23□□□□□ -0.29
SREBF1-218ENST00000578469 UBE2L3P68036 154 aaKnown RBP13.23□□□□□ -0.29
SREBF1-218ENST00000578469 SRSF2Q01130 221 aaKnown RBP13.23□□□□□ -0.29
SREBF1-218ENST00000578469 C15orf32Q32M92 178 aa13.23□□□□□ -0.29
SREBF1-218ENST00000578469 C19orf54Q5BKX5 351 aa13.23□□□□□ -0.29
SREBF1-218ENST00000578469 SVEP1Q4LDE5 3571 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 TRBV7-1A0A0A6YYK4 115 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 FAM223BA6NKX1 122 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 NUPL2O15504 423 aaKnown RBP13.22□□□□□ -0.29
SREBF1-218ENST00000578469 BRI3O95415 125 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 S100A7P31151 101 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 ATP5G3P48201 142 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 ATP5G2Q06055 141 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 PNRC1Q12796 327 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-218ENST00000578469 RHEBQ15382 184 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 AWAT1Q58HT5 328 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 FAM223AQ8IWN6 122 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 ZNF502Q8TBZ5 544 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 ZNF503Q96F45 646 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 MS4A10Q96PG2 267 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 ZNF580Q9UK33 172 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 VPREB3Q9UKI3 123 aa13.22□□□□□ -0.29
SREBF1-218ENST00000578469 YTHDF2Q9Y5A9 579 aaKnown RBP13.22□□□□□ -0.29
SREBF1-218ENST00000578469 A0A1W2PRE2 83 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 WI2-2373I1.2A0A1W2PRP0 233 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 F8W735 103 aaPredicted RBP13.21□□□□□ -0.29
SREBF1-218ENST00000578469 TCF21O43680 179 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 IGHV3-23P01764 117 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 BLCAPP62952 87 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 KIAA0141Q14154 515 aaPredicted RBP13.21□□□□□ -0.29
SREBF1-218ENST00000578469 MORN5Q5VZ52 161 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 RPUSD4Q96CM3 377 aaKnown RBP13.21□□□□□ -0.29
SREBF1-218ENST00000578469 RNF125Q96EQ8 232 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 ATP6V0BQ99437 205 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 SMIM7Q9BQ49 75 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 PRDM13Q9H4Q3 707 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 RPS10P5Q9NQ39 176 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 MRPL27Q9P0M9 148 aaKnown RBP13.21□□□□□ -0.29
SREBF1-218ENST00000578469 NAT8Q9UHE5 227 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 RNF24Q9Y225 148 aa13.21□□□□□ -0.29
SREBF1-218ENST00000578469 C7orf77A4D0Y5 90 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 OR2T8A6NH00 312 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 OR2C1O95371 312 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 TRGV3P03979 118 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 IL4P05112 153 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 OR10J4P0C629 311 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 TMEM241Q24JQ0 296 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 ZNF674Q2M3X9 581 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 ZNF491Q8N8L2 437 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-218ENST00000578469 C20orf24Q9BUV8 137 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 SLC25A39Q9BZJ4 359 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-218ENST00000578469 PARLQ9H300 379 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 LINC00527Q9UJ94 153 aa13.2□□□□□ -0.3
SREBF1-218ENST00000578469 B4DEV8 164 aa13.19□□□□□ -0.3
SREBF1-218ENST00000578469 DNASE2O00115 360 aaPredicted RBP13.19□□□□□ -0.3
SREBF1-218ENST00000578469 CTSGP08311 255 aa13.19□□□□□ -0.3
SREBF1-218ENST00000578469 SRP14P37108 136 aaKnown RBP13.19□□□□□ -0.3
SREBF1-218ENST00000578469 C12orf54Q6X4T0 127 aa13.19□□□□□ -0.3
SREBF1-218ENST00000578469 ZNF600Q6ZNG1 722 aa13.19□□□□□ -0.3
SREBF1-218ENST00000578469 SMCO4Q9NRQ5 59 aa13.19□□□□□ -0.3
SREBF1-218ENST00000578469 PYYP10082 97 aa13.18□□□□□ -0.3
SREBF1-218ENST00000578469 GPR183P32249 361 aa13.18□□□□□ -0.3
SREBF1-218ENST00000578469 FXYD5Q96DB9 178 aa13.18□□□□□ -0.3
SREBF1-218ENST00000578469 USMG5Q96IX5 58 aa13.18□□□□□ -0.3
SREBF1-218ENST00000578469 SHANK2-AS3Q9BTD1 123 aa13.18□□□□□ -0.3
SREBF1-218ENST00000578469 PRSS22Q9GZN4 317 aa13.18□□□□□ -0.3
SREBF1-218ENST00000578469 SDF2L1Q9HCN8 221 aa13.18□□□□□ -0.3
SREBF1-218ENST00000578469 TMEM14CQ9P0S9 112 aa13.18□□□□□ -0.3
SREBF1-218ENST00000578469 H3BRN7 92 aa13.17□□□□□ -0.3
SREBF1-218ENST00000578469 HOXA3O43365 443 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-218ENST00000578469 CLEC3BP05452 202 aa13.17□□□□□ -0.3
SREBF1-218ENST00000578469 PPIFP30405 207 aaKnown RBP13.17□□□□□ -0.3
SREBF1-218ENST00000578469 TPPP2P59282 170 aa13.17□□□□□ -0.3
SREBF1-218ENST00000578469 CLEC19AQ6UXS0 136 aa13.17□□□□□ -0.3
SREBF1-218ENST00000578469 C11orf52Q96A22 123 aa13.17□□□□□ -0.3
SREBF1-218ENST00000578469 NOL4LQ96MY1 436 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-218ENST00000578469 NPFFR1Q9GZQ6 430 aa13.17□□□□□ -0.3
SREBF1-218ENST00000578469 SCO2A0A1W2PP80 73 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 BMPR1BO00238 502 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 TGOLN2O43493 480 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 WIPF1O43516 503 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 NDUFB4O95168 129 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 PF4V1P10720 104 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 SUMO1P63165 101 aaKnown RBP13.16□□□□□ -0.3
SREBF1-218ENST00000578469 RELQ04864 619 aaPredicted RBP13.16□□□□□ -0.3
SREBF1-218ENST00000578469 TMEM88Q6PEY1 159 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 BPIFA4PQ86YQ2 179 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 TMEM86BQ8N661 226 aa13.16□□□□□ -0.3
SREBF1-218ENST00000578469 CHRDL1Q9BU40 450 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms