RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 PROSCO94903 275 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 NAPSAO96009 420 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 MT-ND6P03923 174 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 LINC00032P0C843 101 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 CECR9P0C854 216 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 RPS4Y1P22090 263 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 OPRM1P35372 400 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 PPP1CCP36873 323 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 PPICP45877 212 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 INSL3P51460 131 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 SUB1P53999 127 aaKnown RBP eCLIP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 HLA-DRB3P79483 266 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 PNOCQ13519 176 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF345Q14585 488 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 ELOCQ15369 112 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 RRN3P1Q2M238 152 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 MPV17L2Q567V2 206 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 C9orf153Q5TBE3 101 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 LYRM7Q5U5X0 104 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 UNQ9165/PRO28630Q6UXU0 137 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 Q6ZS92 163 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 SPATA12Q7Z6I5 190 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 HMGN2P46Q86SG4 172 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 RPS19BP1Q86WX3 136 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 C10orf126Q8N4M7 172 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 ANKRD29Q8N6D5 301 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 LY6G5BQ8NDX9 201 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF555Q8NEP9 628 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 OR10G2Q8NGC3 310 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 OR10AG1Q8NH19 301 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 SGMS2Q8NHU3 365 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 C18orf32Q8TCD1 76 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 NT5CQ8TCD5 201 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 POP5Q969H6 163 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 PRELID3AQ96N28 172 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 SPACA5Q96QH8 159 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 SLC25A21Q9BQT8 299 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 TMEM70Q9BUB7 260 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 AGPAT4-IT1Q9H0P7 198 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 POMKQ9H5K3 350 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 BCL2L10Q9HD36 194 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 AIG1Q9NVV5 245 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 TMEM242Q9NWH2 141 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 TAAR3PQ9P1P4 343 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 MARCOQ9UEW3 520 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 TRMT112Q9UI30 125 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 AMMECR1Q9Y4X0 333 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 SPCS1Q9Y6A9 102 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 CHCHD2Q9Y6H1 151 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 PLIN4Q96Q06 1357 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF638Q14966 1978 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 RAPGEF6Q8TEU7 1601 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 CC2D2AQ9P2K1 1620 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 NUP210LQ5VU65 1888 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 PPRC1Q5VV67 1664 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 DIP2BQ9P265 1576 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 SETBP1Q9Y6X0 1596 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 FXYD6-FXYD2A0A087WZ82 144 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 A0A1B0GV50 99 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 PLAC8L1A1L4L8 177 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 KNCNA6PVL3 124 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 LYRM9A8MSI8 78 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 UMAD1C9J7I0 102 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 F6UB75 175 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 UQCRQO14949 82 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 PITX3O75364 302 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF737O75373 536 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 LYZL6O75951 148 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 NCR2O95944 276 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 FGF1P05230 155 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 EIF4EP06730 217 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 CRYGAP11844 174 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 COX5AP20674 150 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 PTGDSP41222 190 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 INPP1P49441 399 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 H2BFSP57053 126 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 RPS24P62847 133 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 SEC11AP67812 179 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF90Q03938 601 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 NMSQ5H8A3 153 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 DGAT2L6Q6ZPD8 337 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF493Q6ZR52 646 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 RFLNAQ6ZTI6 216 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 SSX8Q7RTT4 187 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 TRAPPC6BQ86SZ2 158 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 SLC22A24Q8N4F4 322 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 OR10J6PQ8NGY7 276 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 C2orf15Q8WU43 125 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 CCL17Q92583 94 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 LSM10Q969L4 123 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 BORCS8Q96FH0 119 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 GPX7Q96SL4 187 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 TBL1YQ9BQ87 522 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 TM2D3Q9BRN9 247 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 AICDAQ9GZX7 198 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 FXYD6Q9H0Q3 95 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 PCTPQ9UKL6 214 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 WASHC3Q9Y3C0 194 aa2.16□□□□□ -2.06
SMCHD1-202ENST00000577300 URB2Q14146 1524 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms