RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	UTP20	O75691	2785 aa	Known RBP	11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	PSG1	P11464	419 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	RPL27A	P46776	148 aa	Known RBP	11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	PIP4P1	Q86T03	277 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	KCNS1	Q96KK3	526 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	RAB4A	P20338	218 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	RNASE6	Q93091	150 aa	Known RBP	11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	IGF2BP2-AS1	Q96M15	143 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	WASHC3	Q9Y3C0	194 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	GOLT1B	Q9Y3E0	138 aa		11.85	□□□□□ -0.51
PRPF8-216	ENST00000577001	NCBP2L	A6PVI3	153 aa	Known RBP	11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	SIAH2	O43255	324 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	RNF2	Q99496	336 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001		Q9H3A6	140 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	KIR2DL5B	A0A0G2JN68	375 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	KIR2DL5B	A0A0G2JPC4	375 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001		J3KRW8	73 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	COL8A1	P27658	744 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	PPIF	P30405	207 aa	Known RBP	11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	CDSN	Q15517	529 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	KIR2DL5A	Q8N109	375 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	TCRBV4S1A1T	A0A5B7	111 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	SPRY2	O43597	315 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	HYPM	O75409	117 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	FCGR2B	P31994	310 aa	Predicted RBP	11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	PAFAH1B2	P68402	229 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	FOXE3	Q13461	319 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	VMA21	Q3ZAQ7	101 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001		Q6ZS92	163 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001		Q8N976	141 aa		11.84	□□□□□ -0.51
PRPF8-216	ENST00000577001	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	CBY3	A6NI87	242 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001		C9JCJ5	164 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	NDUFS7	O75251	213 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGFL2	Q6UWQ7	119 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	TEX45	Q8NA69	505 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	FAM57A	Q8TBR7	257 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	GTSF1	Q8WW33	167 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	SRSF12	Q8WXF0	261 aa	Known RBP	11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	C11orf52	Q96A22	123 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	RPE	Q96AT9	228 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	GNB1L	Q9BYB4	327 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	EPDR1	Q9UM22	224 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGHV3OR16-10	A0A075B7F0	116 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGLV2-23	P01705	113 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001		P01737	135 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGHV1-8	P0DP01	117 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	LDLRAD2	Q5SZI1	272 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	BET1L	Q9NYM9	111 aa		11.83	□□□□□ -0.52
PRPF8-216	ENST00000577001	PTPN13	Q12923	2485 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	IZUMO1R	A6ND01	250 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	PAX1	P15863	534 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	HLA-DMB	P28068	263 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	BPIFB3	P59826	476 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	SELENOT	P62341	195 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	OSTC	Q9NRP0	149 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	CHEK1	O14757	476 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	ZNF207	O43670	478 aa	Known RBP	11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	CFHR2	P36980	270 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	CA7	P43166	264 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	ZNF833P	Q6ZTB9	187 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	BEND2	Q8NDZ0	799 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	OR5AN1	Q8NGI8	311 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	OSR1	Q8TAX0	266 aa	Predicted RBP	11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGHV1-69-2	A0A0G2JMI3	117 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	SMKR1	H3BMG3	65 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	RNF151	Q2KHN1	245 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	CR1L	Q2VPA4	569 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	TEX43	Q6ZNM6	134 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001	TMEM75	Q8N9X5	138 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001		Q8TAT8	98 aa		11.82	□□□□□ -0.52
PRPF8-216	ENST00000577001		A0A1W2PRE2	83 aa		11.81	□□□□□ -0.52
PRPF8-216	ENST00000577001	FAM106CP	P0CH98	169 aa		11.81	□□□□□ -0.52
PRPF8-216	ENST00000577001	FAM106A	Q4KMX7	169 aa		11.81	□□□□□ -0.52
PRPF8-216	ENST00000577001	LINC00527	Q9UJ94	153 aa		11.81	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGLC7	A0M8Q6	106 aa		11.81	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGLL1	P15814	213 aa		11.81	□□□□□ -0.52
PRPF8-216	ENST00000577001	SUB1	P53999	127 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
PRPF8-216	ENST00000577001	C1orf174	Q8IYL3	243 aa		11.81	□□□□□ -0.52
PRPF8-216	ENST00000577001	FAM90A9P	A6NNJ1	464 aa		11.8	□□□□□ -0.52
PRPF8-216	ENST00000577001	TIMM23	O14925	209 aa		11.8	□□□□□ -0.52
PRPF8-216	ENST00000577001	IL4	P05112	153 aa		11.8	□□□□□ -0.52
PRPF8-216	ENST00000577001	AARD	Q4LEZ3	155 aa		11.8	□□□□□ -0.52
PRPF8-216	ENST00000577001	C8orf49	Q96NF6	230 aa		11.8	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGHV2-26	A0A0B4J1V2	119 aa		11.8	□□□□□ -0.52
PRPF8-216	ENST00000577001	PPIAL4C	A0A0B4J2A2	164 aa		11.8	□□□□□ -0.52
PRPF8-216	ENST00000577001	HLA-DQA1	P01909	254 aa		11.8	□□□□□ -0.52
PRPF8-216	ENST00000577001	PPIAL4G	P0DN37	164 aa		11.8	□□□□□ -0.52
PRPF8-216	ENST00000577001	WDR73	Q6P4I2	378 aa		11.8	□□□□□ -0.52
PRPF8-216	ENST00000577001	SMIM27	A0A1W2PRY6	76 aa		11.79	□□□□□ -0.52
PRPF8-216	ENST00000577001	PSMB11	A5LHX3	300 aa		11.79	□□□□□ -0.52
PRPF8-216	ENST00000577001	ARMS2	P0C7Q2	107 aa		11.79	□□□□□ -0.52
PRPF8-216	ENST00000577001	GATA4	P43694	442 aa		11.79	□□□□□ -0.52
PRPF8-216	ENST00000577001	IGKV3-7	A0A075B6H7	116 aa		11.79	□□□□□ -0.52
PRPF8-216	ENST00000577001	FAM181B	A6NEQ2	426 aa		11.79	□□□□□ -0.52
PRPF8-216	ENST00000577001	UQCRFS1	P47985	274 aa		11.79	□□□□□ -0.52
PRPF8-216	ENST00000577001	TMEM167A	Q8TBQ9	72 aa		11.79	□□□□□ -0.52
PRPF8-216	ENST00000577001	MBD6	Q96DN6	1003 aa		11.79	□□□□□ -0.52
PRPF8-216	ENST00000577001	TMEM133	Q9H2Q1	129 aa		11.79	□□□□□ -0.52
PRPF8-216	ENST00000577001	ACACB	O00763	2458 aa		11.78	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms