RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SBSPONQ8IVN8 264 aa9.97□□□□□ -0.81
RPAIN-216ENST00000575599 OR4X1Q8NH49 305 aa9.97□□□□□ -0.81
RPAIN-216ENST00000575599 TUBA4BQ9H853 241 aa9.97□□□□□ -0.81
RPAIN-216ENST00000575599 ZFAND3Q9H8U3 227 aa9.97□□□□□ -0.81
RPAIN-216ENST00000575599 NPVFQ9HCQ7 196 aa9.97□□□□□ -0.81
RPAIN-216ENST00000575599 UBE2L5PA0A1B0GUS4 154 aa9.96□□□□□ -0.82
RPAIN-216ENST00000575599 K7EMT4 169 aa9.96□□□□□ -0.82
RPAIN-216ENST00000575599 SCGB2A1O75556 95 aa9.96□□□□□ -0.82
RPAIN-216ENST00000575599 NHLRC4P0CG21 123 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-216ENST00000575599 RND2P52198 227 aa9.96□□□□□ -0.82
RPAIN-216ENST00000575599 RAB31Q13636 194 aa9.96□□□□□ -0.82
RPAIN-216ENST00000575599 ZNF600Q6ZNG1 722 aa9.96□□□□□ -0.82
RPAIN-216ENST00000575599 SLC51BQ86UW2 128 aa9.96□□□□□ -0.82
RPAIN-216ENST00000575599 ACY3Q96HD9 319 aa9.96□□□□□ -0.82
RPAIN-216ENST00000575599 WFDC10AQ9H1F0 79 aa9.96□□□□□ -0.82
RPAIN-216ENST00000575599 PUS1Q9Y606 427 aaKnown RBP eCLIP9.96□□□□□ -0.82
RPAIN-216ENST00000575599 IGHV3OR16-13A0A075B7E8 117 aa9.95□□□□□ -0.82
RPAIN-216ENST00000575599 IGHV3-74A0A0B4J1X5 117 aa9.95□□□□□ -0.82
RPAIN-216ENST00000575599 IGHV7-4-1A0A0J9YVY3 117 aa9.95□□□□□ -0.82
RPAIN-216ENST00000575599 FNDC10F2Z333 226 aa9.95□□□□□ -0.82
RPAIN-216ENST00000575599 TPT1P13693 172 aaKnown RBP9.95□□□□□ -0.82
RPAIN-216ENST00000575599 TIGITQ495A1 244 aa9.95□□□□□ -0.82
RPAIN-216ENST00000575599 RPL7L1Q6DKI1 246 aaKnown RBP9.95□□□□□ -0.82
RPAIN-216ENST00000575599 TOMM20LQ6UXN7 152 aa9.95□□□□□ -0.82
RPAIN-216ENST00000575599 ZNF709Q8N972 641 aa9.95□□□□□ -0.82
RPAIN-216ENST00000575599 TMEM116Q8NCL8 245 aa9.95□□□□□ -0.82
RPAIN-216ENST00000575599 GINS3Q9BRX5 216 aa9.95□□□□□ -0.82
RPAIN-216ENST00000575599 C19orf73Q9NVV2 129 aa9.95□□□□□ -0.82
RPAIN-216ENST00000575599 TRAV25A0A0B4J276 109 aa9.94□□□□□ -0.82
RPAIN-216ENST00000575599 A8MZ25 164 aa9.94□□□□□ -0.82
RPAIN-216ENST00000575599 DEFB125Q8N687 156 aa9.94□□□□□ -0.82
RPAIN-216ENST00000575599 RHPN1-AS1Q9BWJ2 59 aa9.94□□□□□ -0.82
RPAIN-216ENST00000575599 WFDC1Q9HC57 220 aa9.94□□□□□ -0.82
RPAIN-216ENST00000575599 SMPXQ9UHP9 88 aa9.94□□□□□ -0.82
RPAIN-216ENST00000575599 U3KQK5 164 aa9.94□□□□□ -0.82
RPAIN-216ENST00000575599 TRAV30A0A087WSZ9 112 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 ZFP92A6NM28 416 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 OR11H12B2RN74 326 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 PRSS46E5RG02 174 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 C17orf112F2Z3M2 114 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 CHEK1O14757 476 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 IGKV1-17P01599 117 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 FGF7P21781 194 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 OR10J1P30954 320 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 GAMTQ14353 236 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 EIF5AL1Q6IS14 154 aaKnown RBP9.93□□□□□ -0.82
RPAIN-216ENST00000575599 TEPPQ6URK8 271 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 HSD17B11Q8NBQ5 300 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 NPIPB3Q92617 1050 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 RNF2Q99496 336 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 SPAG8Q99932 426 aaPredicted RBP9.93□□□□□ -0.82
RPAIN-216ENST00000575599 SRD5A3Q9H8P0 318 aa9.93□□□□□ -0.82
RPAIN-216ENST00000575599 IGKV3-7A0A075B6H7 116 aa9.92□□□□□ -0.82
RPAIN-216ENST00000575599 IGHV3-66A0A0C4DH42 116 aa9.92□□□□□ -0.82
RPAIN-216ENST00000575599 TSPAN4O14817 238 aa9.92□□□□□ -0.82
RPAIN-216ENST00000575599 MPDU1O75352 247 aa9.92□□□□□ -0.82
RPAIN-216ENST00000575599 IGLC1P0CG04 106 aa9.92□□□□□ -0.82
RPAIN-216ENST00000575599 VWC2Q2TAL6 325 aa9.92□□□□□ -0.82
RPAIN-216ENST00000575599 TMEM144Q7Z5S9 345 aa9.92□□□□□ -0.82
RPAIN-216ENST00000575599 GNPNAT1Q96EK6 184 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-216ENST00000575599 WDR61Q9GZS3 305 aaKnown RBP9.92□□□□□ -0.82
RPAIN-216ENST00000575599 CYTL1Q9NRR1 136 aa9.92□□□□□ -0.82
RPAIN-216ENST00000575599 HUWE1Q7Z6Z7 4374 aaKnown RBP9.91□□□□□ -0.82
RPAIN-216ENST00000575599 APOHP02749 345 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-216ENST00000575599 FABP1P07148 127 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 BMI1P35226 326 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 CAMLGP49069 296 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 BAP18Q8IXM2 172 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 ST8SIA2Q92186 375 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 METTL26Q96S19 204 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 PARD6GQ9BYG4 376 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-216ENST00000575599 ZMAT4Q9H898 229 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 KCNIP2Q9NS61 270 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 UBQLN2Q9UHD9 624 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 WDR83OSQ9Y284 106 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 COL7A1Q02388 2944 aa9.91□□□□□ -0.82
RPAIN-216ENST00000575599 OR4C46A6NHA9 309 aa9.9□□□□□ -0.82
RPAIN-216ENST00000575599 TFPI2P48307 235 aa9.9□□□□□ -0.82
RPAIN-216ENST00000575599 HAGHQ16775 308 aa9.9□□□□□ -0.82
RPAIN-216ENST00000575599 STOML3Q8TAV4 291 aa9.9□□□□□ -0.82
RPAIN-216ENST00000575599 Q8WTZ3 238 aa9.9□□□□□ -0.82
RPAIN-216ENST00000575599 RCHY1Q96PM5 261 aa9.9□□□□□ -0.82
RPAIN-216ENST00000575599 RBMY1BA6NDE4 496 aaKnown RBP9.89□□□□□ -0.83
RPAIN-216ENST00000575599 RBMY1EA6NEQ0 496 aaKnown RBP9.89□□□□□ -0.83
RPAIN-216ENST00000575599 RBMY1DP0C7P1 496 aaKnown RBP9.89□□□□□ -0.83
RPAIN-216ENST00000575599 NPPCP23582 126 aa9.89□□□□□ -0.83
RPAIN-216ENST00000575599 ATP6V0CP27449 155 aa9.89□□□□□ -0.83
RPAIN-216ENST00000575599 YPEL3P61236 119 aaPredicted RBP9.89□□□□□ -0.83
RPAIN-216ENST00000575599 RPL11P62913 178 aaKnown RBP9.89□□□□□ -0.83
RPAIN-216ENST00000575599 TCF24Q7RTU0 167 aa9.89□□□□□ -0.83
RPAIN-216ENST00000575599 GBGT1Q8N5D6 347 aa9.89□□□□□ -0.83
RPAIN-216ENST00000575599 TM2D3Q9BRN9 247 aa9.89□□□□□ -0.83
RPAIN-216ENST00000575599 TMEM231Q9H6L2 316 aa9.89□□□□□ -0.83
RPAIN-216ENST00000575599 AGPAT2O15120 278 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 TOMM40O96008 361 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 IFNA7P01567 189 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 IL4P05112 153 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 RD3LP0DJH9 198 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 SELENOTP62341 195 aa9.88□□□□□ -0.83
RPAIN-216ENST00000575599 CYP2G1PQ6ZSU1 146 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms