RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CLEC2AQ6UVW9 174 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 BAGE2Q86Y30 109 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 C10orf105Q8TEF2 133 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 RNF125Q96EQ8 232 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 MYO18BQ8IUG5 2567 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 XKRY2A2RUG3 117 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 PRB1P04280 392 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 EGR2P11161 476 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-208ENST00000574755 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 HSPB9Q9BQS6 159 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 Q9H3A6 140 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 SERTAD4Q9NUC0 356 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 C21orf62Q9NYP8 219 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 NDUFS8O00217 210 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 UTP20O75691 2785 aaKnown RBP11.04□□□□□ -0.64
VPS33B-208ENST00000574755 OR2J3O76001 311 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 OR8I2Q8N0Y5 310 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 C5orf17Q8NAS9 161 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 TMUB1Q9BVT8 246 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 TMEM14CQ9P0S9 112 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 CRYBG3Q68DQ2 2970 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 IGHV3OR16-10A0A075B7F0 116 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 PAX8Q06710 450 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 TMEM183BQ1AE95 376 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 TMEM183AQ8IXX5 376 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 SGK494Q96LW2 274 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 TMEM68Q96MH6 324 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 ATG101Q9BSB4 218 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 SHANK2-AS3Q9BTD1 123 aa11.04□□□□□ -0.64
VPS33B-208ENST00000574755 NDUFB8O95169 186 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 IGHV3-23P01764 117 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 HIST1H1EP10412 219 aaKnown RBP11.03□□□□□ -0.64
VPS33B-208ENST00000574755 FABP4P15090 132 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 YPEL3P61236 119 aaPredicted RBP11.03□□□□□ -0.64
VPS33B-208ENST00000574755 BPIFA4PQ86YQ2 179 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 ZNF48Q96MX3 618 aaPredicted RBP11.03□□□□□ -0.64
VPS33B-208ENST00000574755 ZNF586Q9NXT0 402 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 CELSR1Q9NYQ6 3014 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 ZFHX3Q15911 3703 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 ZNF705GA8MUZ8 300 aaPredicted RBP11.03□□□□□ -0.64
VPS33B-208ENST00000574755 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
VPS33B-208ENST00000574755 H3BRN7 92 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 ECSCRQ19T08 205 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 OR10D4PQ8NGN7 298 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 NIT2Q9NQR4 276 aa11.03□□□□□ -0.64
VPS33B-208ENST00000574755 WI2-2373I1.2A0A1W2PRP0 233 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 VWC2LB2RUY7 222 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 ATP6V0E1O15342 81 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 FCGR2BP31994 310 aaPredicted RBP11.02□□□□□ -0.65
VPS33B-208ENST00000574755 PRR27Q6MZM9 219 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 UNQ5815/PRO19632Q6UWF5 114 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 SPOCK3Q9BQ16 436 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 FBXL7Q9UJT9 491 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 ZFYVE26Q68DK2 2539 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 SPG11Q96JI7 2443 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 IGHV4-30-2A0A087WSY4 118 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 TRAV40A0A0B4J280 105 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 OR2T8A6NH00 312 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 TCRAP04437 139 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 CBLN1P23435 193 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 TCL1AP56279 114 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 USF2Q15853 346 aaPredicted RBP11.02□□□□□ -0.65
VPS33B-208ENST00000574755 BRD3OSQ6XYD6 125 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 KLF12Q9Y4X4 402 aa11.02□□□□□ -0.65
VPS33B-208ENST00000574755 IGHV1-69DA0A0B4J2H0 117 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 SPINK4O60575 86 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 IGHV1-69P01742 117 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 RPL19P84098 196 aaKnown RBP11.01□□□□□ -0.65
VPS33B-208ENST00000574755 S100A7AQ86SG5 101 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 OTORQ9NRC9 128 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 SCGB2A1O75556 95 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 CA1P00915 261 aaPredicted RBP11.01□□□□□ -0.65
VPS33B-208ENST00000574755 ADMP35318 185 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 IER3P46695 156 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
VPS33B-208ENST00000574755 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 FAM110DQ8TAY7 271 aaPredicted RBP11.01□□□□□ -0.65
VPS33B-208ENST00000574755 CMTM2Q8TAZ6 248 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 FMC1Q96HJ9 113 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 GPR82Q96P67 336 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 HIST1H2BLQ99880 126 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 RNF24Q9Y225 148 aa11.01□□□□□ -0.65
VPS33B-208ENST00000574755 MAP1AP78559 2803 aaPredicted RBP11□□□□□ -0.65
VPS33B-208ENST00000574755 CELSR2Q9HCU4 2923 aa11□□□□□ -0.65
VPS33B-208ENST00000574755 SH2D7A6NKC9 451 aaPredicted RBP11□□□□□ -0.65
VPS33B-208ENST00000574755 SLC35B1P78383 322 aa11□□□□□ -0.65
VPS33B-208ENST00000574755 PYY3Q5JQD4 70 aa11□□□□□ -0.65
VPS33B-208ENST00000574755 FAM231DQ6ZW35 169 aa11□□□□□ -0.65
VPS33B-208ENST00000574755 BCL6BQ8N143 479 aaPredicted RBP11□□□□□ -0.65
VPS33B-208ENST00000574755 SMIM12Q96EX1 92 aa11□□□□□ -0.65
VPS33B-208ENST00000574755 BBC3Q96PG8 261 aaPredicted RBP11□□□□□ -0.65
VPS33B-208ENST00000574755 TRBV19A0A075B6N1 114 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 SMIM27A0A1W2PRY6 76 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 SNURFLB1AK76 121 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 TMEM219Q86XT9 240 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 PACRGQ96M98 296 aaPredicted RBP10.99□□□□□ -0.65
VPS33B-208ENST00000574755 MRPL18Q9H0U6 180 aaKnown RBP10.99□□□□□ -0.65
VPS33B-208ENST00000574755 GATCO43716 136 aaKnown RBP10.99□□□□□ -0.65
VPS33B-208ENST00000574755 FRMD6-AS1P0C7T7 363 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms