RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 C10orf55Q5SWW7 151 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 BOD1L2Q8IYS8 172 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 FLYWCH2Q96CP2 140 aaKnown RBP11.58□□□□□ -0.56
SMG6-215ENST00000574501 GFRA4Q9GZZ7 299 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 KBTBD11-OT1A0A1B0GTJ5 212 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 FBLL1A6NHQ2 334 aaKnown RBP11.57□□□□□ -0.56
SMG6-215ENST00000574501 IFI27P40305 119 aaPredicted RBP11.57□□□□□ -0.56
SMG6-215ENST00000574501 Q5PR19 223 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 C6orf15Q6UXA7 325 aaPredicted RBP11.57□□□□□ -0.56
SMG6-215ENST00000574501 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.57□□□□□ -0.56
SMG6-215ENST00000574501 FMC1Q96HJ9 113 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 NDUFA4L2Q9NRX3 87 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 SPRR3Q9UBC9 169 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 SMAD7O15105 426 aaKnown RBP11.57□□□□□ -0.56
SMG6-215ENST00000574501 ZNF207O43670 478 aaKnown RBP11.57□□□□□ -0.56
SMG6-215ENST00000574501 CXCL12P48061 93 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 HSD52Q0P140 79 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 INO80CQ6PI98 192 aaPredicted RBP11.57□□□□□ -0.56
SMG6-215ENST00000574501 ADAMTSL5Q6ZMM2 481 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 PCP2Q8IVA1 136 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 ZNF492Q9P255 531 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 PILRBQ9UKJ0 227 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 INSIG2Q9Y5U4 225 aa11.57□□□□□ -0.56
SMG6-215ENST00000574501 hADV38S2A0JD32 116 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 TCRAP04437 139 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 CECR9P0C854 216 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 APOBEC3AP31941 199 aaPredicted RBP11.56□□□□□ -0.56
SMG6-215ENST00000574501 NMUP48645 174 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 CACNG7P62955 275 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 WT1-ASQ06250 92 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 MOGAT3Q86VF5 341 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 OR5A1Q8NGJ0 315 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 TPPP3Q9BW30 176 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 SVILO95425 2214 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 ICE1Q9Y2F5 2266 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 DSCAMO60469 2012 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 A0A096LNJ9 63 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 PATE3B3GLJ2 98 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 C9orf172C9J069 976 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 PRNTQ86SH4 94 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 HARBI1Q96MB7 349 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 Q9H3A6 140 aa11.56□□□□□ -0.56
SMG6-215ENST00000574501 PLXNB1O43157 2135 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 FABP2P12104 132 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 CFHR2P36980 270 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 ATP5IP56385 69 aaPredicted RBP11.55□□□□□ -0.56
SMG6-215ENST00000574501 CNEP1R1Q8N9A8 125 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 SRSF12Q8WXF0 261 aaKnown RBP11.55□□□□□ -0.56
SMG6-215ENST00000574501 TANC2Q9HCD6 1990 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 ZDBF2Q9HCK1 2354 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 A0A1B0GUT8 65 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 OVOL3O00110 214 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 IGKV3-15P01624 115 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 HOXC12P31275 282 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 SAMD5Q5TGI4 173 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 ZADH2Q8N4Q0 377 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 OR5AN1Q8NGI8 311 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 ABHD17AQ96GS6 310 aa11.55□□□□□ -0.56
SMG6-215ENST00000574501 IGHV3-21A0A0B4J1V1 117 aa11.54□□□□□ -0.56
SMG6-215ENST00000574501 DEFB108BQ8NET1 73 aa11.54□□□□□ -0.56
SMG6-215ENST00000574501 C22orf46C9J442 243 aa11.54□□□□□ -0.56
SMG6-215ENST00000574501 NPIPB6E9PJ23 425 aa11.54□□□□□ -0.56
SMG6-215ENST00000574501 SMIM17P0DL12 118 aa11.54□□□□□ -0.56
SMG6-215ENST00000574501 FCGR2BP31994 310 aaPredicted RBP11.54□□□□□ -0.56
SMG6-215ENST00000574501 TMEM108Q6UXF1 575 aa11.54□□□□□ -0.56
SMG6-215ENST00000574501 TMEM105Q8N8V8 129 aa11.54□□□□□ -0.56
SMG6-215ENST00000574501 KALRNO60229 2985 aa11.53□□□□□ -0.56
SMG6-215ENST00000574501 CADP27708 2225 aa11.53□□□□□ -0.56
SMG6-215ENST00000574501 MSMPQ1L6U9 139 aa11.53□□□□□ -0.56
SMG6-215ENST00000574501 PEAR1Q5VY43 1037 aaPredicted RBP11.53□□□□□ -0.56
SMG6-215ENST00000574501 Q86TA4 180 aa11.53□□□□□ -0.56
SMG6-215ENST00000574501 WFDC3Q8IUB2 231 aa11.53□□□□□ -0.56
SMG6-215ENST00000574501 OR9G4Q8NGQ1 327 aa11.53□□□□□ -0.56
SMG6-215ENST00000574501 SIGMAR1Q99720 223 aa11.53□□□□□ -0.56
SMG6-215ENST00000574501 PPIAL4EA0A075B759 164 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 TRGV5A0A0B4J1U4 118 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 SERTM2A0A1B0GWG4 89 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 CGB1A6NKQ9 187 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 NKX2-8O15522 239 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 PPIAL4FP0DN26 164 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 GOLT1AQ6ZVE7 132 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 EXOC3-AS1Q8N2X6 119 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 STXBP6Q8NFX7 210 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 DPF1Q92782 380 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 MRPL20Q9BYC9 149 aaKnown RBP11.52□□□□□ -0.56
SMG6-215ENST00000574501 DSCAML1Q8TD84 2053 aa11.52□□□□□ -0.56
SMG6-215ENST00000574501 K7ERJ3 54 aa11.52□□□□□ -0.57
SMG6-215ENST00000574501 APELAP0DMC3 54 aa11.52□□□□□ -0.57
SMG6-215ENST00000574501 GCSHP23434 173 aa11.52□□□□□ -0.57
SMG6-215ENST00000574501 RPRMLQ8N4K4 120 aa11.52□□□□□ -0.57
SMG6-215ENST00000574501 OR4X2Q8NGF9 303 aa11.52□□□□□ -0.57
SMG6-215ENST00000574501 SVIPQ8NHG7 77 aa11.52□□□□□ -0.57
SMG6-215ENST00000574501 SIGLEC8Q9NYZ4 499 aa11.52□□□□□ -0.57
SMG6-215ENST00000574501 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.57
SMG6-215ENST00000574501 TSSC4Q9Y5U2 329 aaPredicted RBP11.52□□□□□ -0.57
SMG6-215ENST00000574501 ABCA1O95477 2261 aa11.52□□□□□ -0.57
SMG6-215ENST00000574501 D6R8Y8 96 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 SPRY3O43610 288 aa11.51□□□□□ -0.57
SMG6-215ENST00000574501 GP9P14770 177 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms