RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 PINLYPA6NC86 204 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 TFPI2P48307 235 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 SHANK2-AS3Q9BTD1 123 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 FAM223BA6NKX1 122 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 ATXN8Q156A1 80 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 FAM223AQ8IWN6 122 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 ZNF815PA8K554 130 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 ZNF474Q6S9Z5 364 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 ZNF329Q86UD4 541 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 TMEM256Q8N2U0 113 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 C8orf31Q8N9H6 132 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 PRSS22Q9GZN4 317 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 COX11Q9Y6N1 276 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 TIMM23O14925 209 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 PAX9P55771 341 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 TAL2Q16559 108 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 C5orf64Q2M2E5 130 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 S100A7L2Q5SY68 101 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 CCL19Q99731 98 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 SIGLEC9Q9Y336 463 aa10.13□□□□□ -0.79
PCDHGA9-201ENST00000573521 LINC00473A8K010 186 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 APOMO95445 188 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 ATP1A1-AS1Q5TC04 95 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 SIGLEC15Q6ZMC9 328 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 Q86TA4 180 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 FAM168AQ92567 244 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 DLX4Q92988 240 aaPredicted RBP10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 SIVA1O15304 175 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 SRSF2Q01130 221 aaKnown RBP10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 FAM201AQ5SY85 155 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 Q6ZRM9 215 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 NEGR1Q7Z3B1 354 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 ST6GALNAC6Q969X2 333 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 GAFA1Q96PS6 74 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 SPANXCQ9NY87 97 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 VWA8A3KMH1 1905 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 PTPRDP23468 1912 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 VDAC2P45880 294 aaPredicted RBP10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 TMEM200BQ69YZ2 307 aa10.12□□□□□ -0.79
PCDHGA9-201ENST00000573521 NDUFA3O95167 84 aa10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 HGFACQ04756 655 aa10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 RSPO4Q2I0M5 234 aaPredicted RBP10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 K7EMI3 77 aa10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 WIPF2Q8TF74 440 aaPredicted RBP10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 PYGO2Q9BRQ0 406 aa10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 TRBV20-1A0A075B6N2 111 aa10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 SMAD7O15105 426 aaKnown RBP10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 DUX3Q96PT4 197 aa10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 MYLKQ15746 1914 aa10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 A0A0G2JRQ6 117 aa10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 PRSS46E5RG02 174 aa10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 KIR3DL3Q8N743 410 aa10.11□□□□□ -0.79
PCDHGA9-201ENST00000573521 TRAV8-2A0A0B4J237 113 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 ZNF418Q8TF45 676 aaPredicted RBP10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 C9JQL5 133 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 D6R8Y8 96 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 ZNHIT1O43257 154 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 FNDC4Q9H6D8 234 aaPredicted RBP10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 IGKV1D-17A0A075B6S4 117 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 IGKV1-6A0A0C4DH72 117 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 PMS2P5A8MQ11 134 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 HAX1O00165 279 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 CD59P13987 128 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 VWC2Q2TAL6 325 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 LYZL1Q6UWQ5 148 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 C20orf204Q6ZNR8 217 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 RNF138Q8WVD3 245 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 MEGF9Q9H1U4 602 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 PLXNA2O75051 1894 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 RNASE4P34096 147 aaKnown RBP10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 GUSBP1Q15486 140 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 LGALS9BQ3B8N2 356 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 LGALS9CQ6DKI2 356 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 LINC01560Q8TB33 94 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 C18orf32Q8TCD1 76 aa10.1□□□□□ -0.79
PCDHGA9-201ENST00000573521 SMIM27A0A1W2PRY6 76 aa10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 ESDP10768 282 aa10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 ZNF562Q6V9R5 426 aa10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 VOPP1Q96AW1 172 aa10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 NDUFA4L2Q9NRX3 87 aa10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 TRAV41A0A0B4J266 112 aa10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 BUB1B-PAK6H3BSN5 160 aa10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 CD7P09564 240 aa10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 POLR3KQ9Y2Y1 108 aaPredicted RBP10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 ABHD17AQ96GS6 310 aa10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 FNDC1Q4ZHG4 1894 aaPredicted RBP10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 NLRC5Q86WI3 1866 aa10.09□□□□□ -0.79
PCDHGA9-201ENST00000573521 TRAV8-4A0A0B4J246 113 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 EFNA4P52798 201 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 ZNF833PQ6ZTB9 187 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 OR10W1Q8NGF6 305 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 ARHGEF17Q96PE2 2063 aaPredicted RBP10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 TRAV5A0A0B4J249 113 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 MLNRO43193 412 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 SH2D1AO60880 128 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 IGLC2P0DOY2 106 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 IGLC3P0DOY3 106 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 Q6ZS92 163 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms