RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TMEM14EPQ6UXP3 125 aa8.09□□□□□ -1.11
SMG6-213ENST00000573166 CCL20P78556 96 aa8.09□□□□□ -1.11
SMG6-213ENST00000573166 TREML4Q6UXN2 200 aa8.09□□□□□ -1.11
SMG6-213ENST00000573166 PRNTQ86SH4 94 aa8.09□□□□□ -1.11
SMG6-213ENST00000573166 UFC1Q9Y3C8 167 aa8.09□□□□□ -1.11
SMG6-213ENST00000573166 C15orf62A8K5M9 175 aa8.09□□□□□ -1.11
SMG6-213ENST00000573166 ORM1P02763 201 aa8.09□□□□□ -1.11
SMG6-213ENST00000573166 MEF2BQ02080 365 aaPredicted RBP8.09□□□□□ -1.11
SMG6-213ENST00000573166 PACRGQ96M98 296 aaPredicted RBP8.09□□□□□ -1.11
SMG6-213ENST00000573166 SRSF8Q9BRL6 282 aaKnown RBP8.09□□□□□ -1.11
SMG6-213ENST00000573166 NDUFA4L2Q9NRX3 87 aa8.09□□□□□ -1.11
SMG6-213ENST00000573166 CARHSP1Q9Y2V2 147 aaKnown RBP8.09□□□□□ -1.11
SMG6-213ENST00000573166 GATCO43716 136 aaKnown RBP8.08□□□□□ -1.12
SMG6-213ENST00000573166 IGKV3-20P01619 116 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 LEMD1Q68G75 181 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 WFDC1Q9HC57 220 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 HELZ2Q9BYK8 2649 aaKnown RBP8.08□□□□□ -1.12
SMG6-213ENST00000573166 COLCA2A8K830 154 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 FSTL3O95633 263 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 GCHFRP30047 84 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 GSN-AS1Q9NRJ2 163 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 SERTM2A0A1B0GWG4 89 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 PSG1P11464 419 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 ICAM4Q14773 271 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 SPSB3Q6PJ21 355 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 ZNF295-AS1Q8N0V1 137 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 TRBV7-1A0A0A6YYK4 115 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 TGIF2-C20orf24A0A0A6YYL0 155 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 NDUFB4O95168 129 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 HLA-DRB1P01911 266 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 IGHV4-31P0DP07 118 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 PMCHP20382 165 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 HNRNPA3P51991 378 aaKnown RBP8.08□□□□□ -1.12
SMG6-213ENST00000573166 CD81P60033 236 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 PSG9Q00887 426 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 TMEM183BQ1AE95 376 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 MIR17HGQ75NE6 70 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 FAM110DQ8TAY7 271 aaPredicted RBP8.08□□□□□ -1.12
SMG6-213ENST00000573166 SGK494Q96LW2 274 aa8.08□□□□□ -1.12
SMG6-213ENST00000573166 TRGC2P03986 189 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 SMIM17P0DL12 118 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 C12orf54Q6X4T0 127 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 GTF2H5Q6ZYL4 71 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 SGMS2Q8NHU3 365 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 GPR61Q9BZJ8 451 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 RNF114Q9Y508 228 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 SELENOKQ9Y6D0 94 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 ARL2-SNX15V9GYD0 113 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 CGB3P0DN86 165 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 CGB7P0DN87 165 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 BLCAPP62952 87 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 WT1-ASQ06250 92 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 LY6G5BQ8NDX9 201 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 IGHV3OR16-12A0A075B7B8 117 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 LOC102724200A0A096LPH7 203 aaPredicted RBP8.07□□□□□ -1.12
SMG6-213ENST00000573166 FAM223BA6NKX1 122 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 HIST1H1AQ02539 215 aaPredicted RBP8.07□□□□□ -1.12
SMG6-213ENST00000573166 POU2AF1Q16633 256 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 FAM223AQ8IWN6 122 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 BCL6BQ8N143 479 aaPredicted RBP8.07□□□□□ -1.12
SMG6-213ENST00000573166 TXNDC17Q9BRA2 123 aa8.07□□□□□ -1.12
SMG6-213ENST00000573166 TMSB15BA0A087X1C1 80 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 NDUFB8O95169 186 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 CRISP2P16562 243 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 TCF23Q7RTU1 214 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 GGTLC1Q9BX51 225 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 M0R143 59 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 SPINK4O60575 86 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 CRYBB3P26998 211 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 GCSAMLQ5JQS6 135 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 GOLT1AQ6ZVE7 132 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 OR4C5Q8NGB2 326 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 OR10G8Q8NGN5 311 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 PEF1Q9UBV8 284 aaKnown RBP8.06□□□□□ -1.12
SMG6-213ENST00000573166 P01737 135 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 AMTP48728 403 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 C19orf35Q6ZS72 473 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 FOXC2Q99958 501 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 TUBA4BQ9H853 241 aa8.06□□□□□ -1.12
SMG6-213ENST00000573166 SAP30O75446 220 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 TMEM95Q3KNT9 176 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 COX19Q49B96 90 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 WDR73Q6P4I2 378 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 ZNF25P17030 456 aaPredicted RBP8.05□□□□□ -1.12
SMG6-213ENST00000573166 GFI1BQ5VTD9 330 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 RAX2Q96IS3 184 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 CXorf65A6NEN9 183 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 NDUFS6O75380 124 aaKnown RBP8.05□□□□□ -1.12
SMG6-213ENST00000573166 TMEM50AO95807 157 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 SYNJ2BPP57105 145 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 PKIAP61925 76 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 TRGV9Q99603 122 aa8.05□□□□□ -1.12
SMG6-213ENST00000573166 TCL1AP56279 114 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 LDLRAD2Q5SZI1 272 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 UTF1Q5T230 341 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 F8P00451 2351 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 F5H697 171 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 RPL15P61313 204 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms