RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 BUB3O43684 328 aa9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 PITX3O75364 302 aa9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 MED6O75586 246 aa9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 SFT2D2O95562 160 aa9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 RPP30P78346 268 aaKnown RBP9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 GAMTQ14353 236 aa9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 ANKRD39Q53RE8 183 aa9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 TRIQKQ629K1 86 aa9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 OR8G2PQ6IF36 304 aa9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 CIB3Q96Q77 187 aaPredicted RBP9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 FBXL17Q9UF56 701 aa9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 EPPK1P58107 5090 aaKnown RBP9.02□□□□□ -0.97
CTDNEP1-205ENST00000570828 DEFB4AO15263 64 aa9.01□□□□□ -0.97
CTDNEP1-205ENST00000570828 HOXB5P09067 269 aa9.01□□□□□ -0.97
CTDNEP1-205ENST00000570828 C4BPBP20851 252 aa9.01□□□□□ -0.97
CTDNEP1-205ENST00000570828 NANOS2P60321 138 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-205ENST00000570828 LYZP61626 148 aa9.01□□□□□ -0.97
CTDNEP1-205ENST00000570828 ZNF90Q03938 601 aa9.01□□□□□ -0.97
CTDNEP1-205ENST00000570828 RAB40CQ96S21 281 aa9.01□□□□□ -0.97
CTDNEP1-205ENST00000570828 SRRQ9GZT4 340 aa9.01□□□□□ -0.97
CTDNEP1-205ENST00000570828 SEPSECSQ9HD40 501 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-205ENST00000570828 IGKV1D-37A0A075B6S9 117 aa9□□□□□ -0.97
CTDNEP1-205ENST00000570828 SYNGR2O43760 224 aa9□□□□□ -0.97
CTDNEP1-205ENST00000570828 GIG44P09565 113 aaPredicted RBP9□□□□□ -0.97
CTDNEP1-205ENST00000570828 UBE2MP61081 183 aaKnown RBP9□□□□□ -0.97
CTDNEP1-205ENST00000570828 NUTF2P61970 127 aaKnown RBP9□□□□□ -0.97
CTDNEP1-205ENST00000570828 Q8NAQ8 132 aa9□□□□□ -0.97
CTDNEP1-205ENST00000570828 PPP1R14BQ96C90 147 aa9□□□□□ -0.97
CTDNEP1-205ENST00000570828 TRGV9Q99603 122 aa9□□□□□ -0.97
CTDNEP1-205ENST00000570828 MAGT1Q9H0U3 335 aa9□□□□□ -0.97
CTDNEP1-205ENST00000570828 IGHV4-28A0A0C4DH34 117 aa8.99□□□□□ -0.97
CTDNEP1-205ENST00000570828 NAP1L6A6NFF2 107 aa8.99□□□□□ -0.97
CTDNEP1-205ENST00000570828 SNRPGP15A8MWD9 76 aa8.99□□□□□ -0.97
CTDNEP1-205ENST00000570828 WRBO00258 174 aa8.99□□□□□ -0.97
CTDNEP1-205ENST00000570828 MIFP14174 115 aa8.99□□□□□ -0.97
CTDNEP1-205ENST00000570828 OR2F1Q13607 317 aa8.99□□□□□ -0.97
CTDNEP1-205ENST00000570828 GGNBP1Q5YKI7 109 aa8.99□□□□□ -0.97
CTDNEP1-205ENST00000570828 C1QTNF4Q9BXJ3 329 aa8.99□□□□□ -0.97
CTDNEP1-205ENST00000570828 CLEC5AQ9NY25 188 aa8.99□□□□□ -0.97
CTDNEP1-205ENST00000570828 BIRC6Q9NR09 4857 aa8.98□□□□□ -0.97
CTDNEP1-205ENST00000570828 ZNF705EA8MWA4 302 aaPredicted RBP8.98□□□□□ -0.97
CTDNEP1-205ENST00000570828 NDUFB6O95139 128 aa8.98□□□□□ -0.97
CTDNEP1-205ENST00000570828 SPANXN5Q5MJ07 72 aa8.98□□□□□ -0.97
CTDNEP1-205ENST00000570828 C1orf194Q5T5A4 169 aa8.98□□□□□ -0.97
CTDNEP1-205ENST00000570828 THAP8Q8NA92 274 aa8.98□□□□□ -0.97
CTDNEP1-205ENST00000570828 COQ8AQ8NI60 647 aa8.98□□□□□ -0.97
CTDNEP1-205ENST00000570828 HRH4Q9H3N8 390 aa8.98□□□□□ -0.97
CTDNEP1-205ENST00000570828 TBC1D24Q9ULP9 559 aa8.98□□□□□ -0.97
CTDNEP1-205ENST00000570828 LINC00854A0A1B0GVQ3 168 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 C9orf170A2RU37 121 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 CENPXA8MT69 81 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 H3BMM0 161 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 H3BP45 60 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 CFDP00746 253 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 HLA-DRB4P13762 266 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 ID1P41134 155 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 NKX2-1P43699 371 aaPredicted RBP8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 PSMB3P49720 205 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 AKR1C1Q04828 323 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 BAK1Q16611 211 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 LCE4AQ5TA78 99 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 OR8I2Q8N0Y5 310 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 ARL6IP6Q8N6S5 226 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 C2CD4CQ8TF44 421 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 LINC00052Q96N35 136 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 STRAPQ9Y3F4 350 aaKnown RBP8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 HLA-DRB4X5D2U9 266 aa8.97□□□□□ -0.97
CTDNEP1-205ENST00000570828 IGKV1OR2-108A0A075B7D4 117 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 C11orf94C9JXX5 98 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 PRSS46E5RG02 174 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 ADAP1O75689 374 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 IFNA21P01568 189 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 RBMY1A1P0DJD3 496 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 RBMY1CP0DJD4 496 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 RBMY1FQ15415 496 aaKnown RBP8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 SAMD13Q5VXD3 122 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 CDPF1Q6NVV7 123 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 ACOT7LQ6ZUV0 252 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 CSNK1G2-AS1Q8NCQ2 148 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 KRTAP4-11Q9BYQ6 195 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 XCL2Q9UBD3 114 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 X6R8D5 127 aa8.96□□□□□ -0.98
CTDNEP1-205ENST00000570828 SMCO3A2RU48 225 aa8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 SSSCA1O60232 199 aa8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 OR4E1P0C645 316 aa8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 S100A7P31151 101 aa8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 POLR2GP62487 172 aaKnown RBP eCLIP8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 LGALS9CQ6DKI2 356 aa8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 FOXI2Q6ZQN5 318 aa8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 BPIFCQ8NFQ6 507 aa8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 C7orf50Q9BRJ6 194 aaKnown RBP8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 SLC25A22Q9H936 323 aa8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 SLC45A2Q9UMX9 530 aa8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 FLVCR2Q9UPI3 526 aa8.95□□□□□ -0.98
CTDNEP1-205ENST00000570828 ISLRO14498 428 aa8.94□□□□□ -0.98
CTDNEP1-205ENST00000570828 SOCS3O14543 225 aa8.94□□□□□ -0.98
CTDNEP1-205ENST00000570828 IGKV3-20P01619 116 aa8.94□□□□□ -0.98
CTDNEP1-205ENST00000570828 ORM2P19652 201 aa8.94□□□□□ -0.98
CTDNEP1-205ENST00000570828 ANXA7P20073 488 aaKnown RBP8.94□□□□□ -0.98
CTDNEP1-205ENST00000570828 HLA-DMBP28068 263 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms