RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 CLEC5AQ9NY25 188 aa3.93□□□□□ -1.78
CHD3-212ENST00000570758 STRAPQ9Y3F4 350 aaKnown RBP3.93□□□□□ -1.78
CHD3-212ENST00000570758 X6R8D5 127 aa3.93□□□□□ -1.78
CHD3-212ENST00000570758 TRAV6A0A075B6T7 132 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 IGHV4-28A0A0C4DH34 117 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 SMCO3A2RU48 225 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 NUPR2A6NF83 97 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 ZNF705EA8MWA4 302 aaPredicted RBP3.92□□□□□ -1.78
CHD3-212ENST00000570758 SCGB1D2O95969 90 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 MBPP02686 304 aaPredicted RBP3.92□□□□□ -1.78
CHD3-212ENST00000570758 TCRBP04435 133 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 FABP1P07148 127 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 METTL15P1P0C7V9 234 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 HLA-DRB4P13762 266 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 ORM2P19652 201 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 NUP62P37198 522 aaPredicted RBP3.92□□□□□ -1.78
CHD3-212ENST00000570758 RRAS2P62070 204 aaPredicted RBP3.92□□□□□ -1.78
CHD3-212ENST00000570758 SNRPD3P62318 126 aaKnown RBP3.92□□□□□ -1.78
CHD3-212ENST00000570758 AKR1C1Q04828 323 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 CNPY1Q3B7I2 92 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 MORN3Q6PF18 240 aaPredicted RBP3.92□□□□□ -1.78
CHD3-212ENST00000570758 CYP2G1PQ6ZSU1 146 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 TMEM144Q7Z5S9 345 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 OR8I2Q8N0Y5 310 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 TMEM217Q8N7C4 229 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 CSNK1G2-AS1Q8NCQ2 148 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 OR1B1Q8NGR6 318 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 C11orf45Q8TAV5 145 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 LINC00476Q8WZB0 136 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 PPP1R14BQ96C90 147 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 C20orf173Q96LM9 149 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 CCDC32Q9BV29 185 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 SCRT1Q9BWW7 348 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 SLC25A32Q9H2D1 315 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 GSKIPQ9P0R6 139 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 FBXL17Q9UF56 701 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 PFDN2Q9UHV9 154 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 TBC1D24Q9ULP9 559 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 RCL1Q9Y2P8 373 aaKnown RBP3.92□□□□□ -1.78
CHD3-212ENST00000570758 HLA-DRB4X5D2U9 266 aa3.92□□□□□ -1.78
CHD3-212ENST00000570758 DNAH6Q9C0G6 4158 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 ELOA3CA0A087WX78 387 aaPredicted RBP3.91□□□□□ -1.78
CHD3-212ENST00000570758 A6NHS1 94 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 ZNF98A6NK75 572 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 F6UB75 175 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 H3BRN7 92 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 TSC22D2O75157 780 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 LY6G6CO95867 125 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 CFDP00746 253 aaPredicted RBP3.91□□□□□ -1.78
CHD3-212ENST00000570758 IGKV3-20P01619 116 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 IL5P05113 134 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 H2AFB2P0C5Z0 115 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 PSMB3P49720 205 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 FXYD7P58549 80 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 TAS2R30P59541 319 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 DLK1P80370 383 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 TMEM41BQ5BJD5 291 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 BPIFCQ8NFQ6 507 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 ZNF431Q8TF32 576 aaPredicted RBP3.91□□□□□ -1.78
CHD3-212ENST00000570758 RSG1Q9BU20 258 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 TMEM147Q9BVK8 224 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 SAV1Q9H4B6 383 aaPredicted RBP3.91□□□□□ -1.78
CHD3-212ENST00000570758 C11orf1Q9H5F2 150 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 SLC25A22Q9H936 323 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 NUDT15Q9NV35 164 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 DOK5Q9P104 306 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 XCL2Q9UBD3 114 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 SLC45A2Q9UMX9 530 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 CELA1Q9UNI1 258 aa3.91□□□□□ -1.78
CHD3-212ENST00000570758 KLK5Q9Y337 293 aaPredicted RBP3.91□□□□□ -1.78
CHD3-212ENST00000570758 TRAV8-2A0A0B4J237 113 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 FAM240BA0A1B0GVZ2 78 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 C7orf66A4D0T2 115 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 A8MTW9 85 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 FAM25EA8MYX2 175 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 FNDC10F2Z333 226 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 K7EPK0 472 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 ISLRO14498 428 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 LINC00869P0C866 280 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 MIFP14174 115 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 ID1P41134 155 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 GALR1P47211 349 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 PLP1P60201 277 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 IFITM3Q01628 133 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 SLC38A11Q08AI6 406 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 IGFL4Q6B9Z1 124 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 PATE2Q6UY27 113 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 FOXI2Q6ZQN5 318 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 C12orf45Q8N5I9 185 aaPredicted RBP3.9□□□□□ -1.79
CHD3-212ENST00000570758 ZNF709Q8N972 641 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 OR10P1Q8NGE3 313 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 C16orf92Q96LL3 132 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 C2orf50Q96LR7 162 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 CLUHP3Q96NS8 147 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 UHRF2Q96PU4 802 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 SHANK2-AS3Q9BTD1 123 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 SLC25A39Q9BZJ4 359 aaPredicted RBP3.9□□□□□ -1.79
CHD3-212ENST00000570758 MFFQ9GZY8 342 aa3.9□□□□□ -1.79
CHD3-212ENST00000570758 SLC35B3Q9H1N7 401 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms