RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	GFI1	Q99684	422 aa		4	□□□□□ -1.77
BBS4-218	ENST00000569440	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4	□□□□□ -1.77
BBS4-218	ENST00000569440	ELF5	Q9UKW6	265 aa	Predicted RBP	4	□□□□□ -1.77
BBS4-218	ENST00000569440	PNMA8C	A0A1B0GUJ8	204 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	RBFOX3	A6NFN3	312 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	ERICH4	A6NGS2	130 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	INS-IGF2	F8WCM5	200 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440		H7BYZ3	331 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	LECT2	O14960	151 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	SCGB2A1	O75556	95 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	IL4	P05112	153 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	NPS	P0C0P6	89 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	HSPE1	P61604	102 aa	Known RBP	3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	DAZ2	Q13117	558 aa	Known RBP	3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	MRPL23	Q16540	153 aa	Known RBP	3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	SFXN4	Q6P4A7	337 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440		Q6ZTI0	123 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	OR1S2	Q8NGQ3	325 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	OR52E5	Q8NH55	327 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	OR51H1	Q8NH63	302 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	SECTM1	Q8WVN6	248 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	APH1B	Q8WW43	257 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	FCAMR	Q8WWV6	532 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	TSC22D3	Q99576	134 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440		Q9HAA7	133 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	MGAT4C	Q9UBM8	478 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	RAB22A	Q9UL26	194 aa		3.99	□□□□□ -1.77
BBS4-218	ENST00000569440	DIMT1	Q9UNQ2	313 aa	Known RBP	3.99	□□□□□ -1.77
BBS4-218	ENST00000569440		A0A075B6Q4	140 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	TMEM272	A0A1B0GTI8	110 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	RNF222	A6NCQ9	220 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	BOLA2-SMG1P6	H3BVE0	249 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	CORT	O00230	105 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	CCNK	O75909	580 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	TOMM40	O96008	361 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	ALPL	P05186	524 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	F2R	P25116	425 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	TNFSF8	P32971	234 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	LPAR6	P43657	344 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	CRYBA4	P53673	196 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	CLDN12	P56749	244 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	FLOT2	Q14254	428 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	LINC01556	Q5JQF7	62 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	C1orf194	Q5T5A4	169 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	AADACL3	Q5VUY0	350 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	SAMD13	Q5VXD3	122 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	ZNF818P	Q6ZRF7	136 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	AMIGO2	Q86SJ2	522 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	SLC24A4	Q8NFF2	622 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	BPIFB6	Q8NFQ5	453 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	FAM3D	Q96BQ1	224 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	TM2D2	Q9BX73	214 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	PRO0255	Q9UI72	69 aa		3.98	□□□□□ -1.77
BBS4-218	ENST00000569440	TRGV2	A0A075B6R0	118 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	IGHV3-38	A0A0C4DH36	116 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	PRAF2	O60831	178 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	TNFRSF6B	O95407	300 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	PPY	P01298	95 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	RD3L	P0DJH9	198 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	RNASE2	P10153	161 aa	Known RBP	3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	MYL12A	P19105	171 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	GADD45A	P24522	165 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	OR10J1	P30954	320 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	FCGR2C	P31995	323 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	SNCA	P37840	140 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	OPRK1	P41145	380 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	HSPA13	P48723	471 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	WNT4	P56705	351 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	ARPC4	P59998	168 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	SMN1	Q16637	294 aa	Known RBP	3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	HSD17B12	Q53GQ0	312 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	HES5	Q5TA89	166 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	PRSS54	Q6PEW0	395 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	C9orf47	Q6ZRZ4	202 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	PPP1R14B	Q96C90	147 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	SLC5A7	Q9GZV3	580 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	PLGRKT	Q9HBL7	147 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	DAPK2	Q9UIK4	370 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	ANXA10	Q9UJ72	324 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440	HHLA3	Q9XRX5	114 aa		3.97	□□□□□ -1.77
BBS4-218	ENST00000569440		A0A0D9SG52	128 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	TMEM235	A6NFC5	223 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	SNURFL	B1AK76	121 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440		K7EQD1	137 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	WBP4	O75554	376 aa	Known RBP	3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	PGLYRP1	O75594	196 aa	Predicted RBP	3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	UCHL1	P09936	223 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	PSMB9	P28065	219 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	NUP62	P37198	522 aa	Predicted RBP	3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	PCP4	P48539	62 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	MEOX2	P50222	304 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	SUB1	P53999	127 aa	Known RBP eCLIP	3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	SUPT4H1	P63272	117 aa	Known RBP	3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	SLA	Q13239	276 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	GAMT	Q14353	236 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	BSX	Q3C1V8	233 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	OR8G2P	Q6IF36	304 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440	MS4A15	Q8N5U1	240 aa		3.96	□□□□□ -1.78
BBS4-218	ENST00000569440		Q8N976	141 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms