RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
LINC00558-201ENST00000569422 A8MWP6 167 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 F2Z2F3 143 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 MFAP4P55083 255 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 FOXL1Q12952 345 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 RPEL1Q2QD12 228 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 PATE2Q6UY27 113 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 PNKDQ8N490 385 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 KIR3DL3Q8N743 410 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 TMEM18Q96B42 140 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 FAM103A1Q9BTL3 118 aaKnown RBP7.03□□□□□ -1.28
LINC00558-201ENST00000569422 PAXXQ9BUH6 204 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 IL36BQ9NZH7 164 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 RPLP1P05386 114 aaKnown RBP7.03□□□□□ -1.28
LINC00558-201ENST00000569422 CD99P14209 185 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 TMEM30BQ3MIR4 351 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 RPEQ96AT9 228 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 VKORC1Q9BQB6 163 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 SNHG12Q9BXW3 62 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 TNFRSF19Q9NS68 423 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 CACNA1BQ00975 2339 aa7.03□□□□□ -1.28
LINC00558-201ENST00000569422 CNIH1O95406 144 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 TYMSP04818 313 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 RPL27AP46776 148 aaKnown RBP7.02□□□□□ -1.29
LINC00558-201ENST00000569422 DLX6P56179 175 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 BAGE3Q86Y29 109 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 BAGE2Q86Y30 109 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 NAT8BQ9UHF3 227 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 WNK2Q9Y3S1 2297 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 ZNF705FA8MVS1 300 aaPredicted RBP7.02□□□□□ -1.29
LINC00558-201ENST00000569422 TNFRSF13BO14836 293 aaPredicted RBP7.02□□□□□ -1.29
LINC00558-201ENST00000569422 ZNF705DP0CH99 300 aaPredicted RBP7.02□□□□□ -1.29
LINC00558-201ENST00000569422 ZNF705BP0CI00 300 aaPredicted RBP7.02□□□□□ -1.29
LINC00558-201ENST00000569422 MFAP2P55001 183 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 JOSD1Q15040 202 aaPredicted RBP7.02□□□□□ -1.29
LINC00558-201ENST00000569422 ZNF672Q499Z4 452 aaPredicted RBP7.02□□□□□ -1.29
LINC00558-201ENST00000569422 IBA57Q5T440 356 aaKnown RBP7.02□□□□□ -1.29
LINC00558-201ENST00000569422 FAM168AQ92567 244 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 FAM167A-AS1Q96KT0 104 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 AMMECR1Q9Y4X0 333 aaPredicted RBP7.02□□□□□ -1.29
LINC00558-201ENST00000569422 V9GYV3 84 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 IGKV1D-37A0A075B6S9 117 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 TCRBV4S1A1TA0A5B7 111 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 TSPAN13O95857 204 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 CRISP2P16562 243 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 KLRD1Q13241 179 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 HES1Q14469 280 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 LRRC75A-AS1Q8N1F1 130 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 BTF3L4Q96K17 158 aa7.02□□□□□ -1.29
LINC00558-201ENST00000569422 NOL4LQ96MY1 436 aaPredicted RBP7.02□□□□□ -1.29
LINC00558-201ENST00000569422 IGHV1-3A0A0C4DH29 117 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 A0A1W2PRX2 142 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 RBP4P02753 201 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 LGALS7P47929 136 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 TIRAPP58753 221 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 LYZP61626 148 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 ZNF664Q8N3J9 261 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 IGLC7A0M8Q6 106 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 PGPA6NDG6 321 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 FNDC10F2Z333 226 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 BUB1B-PAK6H3BSN5 160 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 SLC25A5P05141 298 aaKnown RBP7.01□□□□□ -1.29
LINC00558-201ENST00000569422 GBGT1Q8N5D6 347 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 CMTM2Q8TAZ6 248 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 C11orf52Q96A22 123 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 MS4A10Q96PG2 267 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 CLEC7AQ9BXN2 247 aa7.01□□□□□ -1.29
LINC00558-201ENST00000569422 C9JCJ5 164 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 M0R143 59 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 ISLRO14498 428 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 SERF1AO75920 110 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 SEC61GP60059 68 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 MMDQ15546 238 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 KLF17Q5JT82 389 aaPredicted RBP7□□□□□ -1.29
LINC00558-201ENST00000569422 PPP1R27Q86WC6 154 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 SAMD10Q9BYL1 202 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 KAAG1Q9UBP8 84 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 SIGLEC9Q9Y336 463 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 MRGPRG-AS1Q2M3A8 158 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 LINC00311Q8N616 119 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 OR1L4Q8NGR5 311 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 RNASEH2CQ8TDP1 164 aaKnown RBP7□□□□□ -1.29
LINC00558-201ENST00000569422 A0A1W2PRE2 83 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 CORTO00230 105 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 TIMM23O14925 209 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 UBE2G1P62253 170 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 ZNF841Q6ZN19 808 aa7□□□□□ -1.29
LINC00558-201ENST00000569422 PSMB11A5LHX3 300 aa6.99□□□□□ -1.29
LINC00558-201ENST00000569422 IGLV2-8P01709 118 aa6.99□□□□□ -1.29
LINC00558-201ENST00000569422 CAMPP49913 170 aa6.99□□□□□ -1.29
LINC00558-201ENST00000569422 COA6Q5JTJ3 125 aaKnown RBP6.99□□□□□ -1.29
LINC00558-201ENST00000569422 LDLRAD2Q5SZI1 272 aa6.99□□□□□ -1.29
LINC00558-201ENST00000569422 MRPL52Q86TS9 123 aaKnown RBP6.99□□□□□ -1.29
LINC00558-201ENST00000569422 OR8B3Q8NGG8 313 aa6.99□□□□□ -1.29
LINC00558-201ENST00000569422 OR4A5Q8NH83 315 aa6.99□□□□□ -1.29
LINC00558-201ENST00000569422 OR8B2Q96RD0 313 aa6.99□□□□□ -1.29
LINC00558-201ENST00000569422 C19orf24Q9BVV8 132 aa6.99□□□□□ -1.29
LINC00558-201ENST00000569422 MRPL32Q9BYC8 188 aaKnown RBP6.99□□□□□ -1.29
LINC00558-201ENST00000569422 ZNF329Q86UD4 541 aa6.99□□□□□ -1.29
LINC00558-201ENST00000569422 SRSF12Q8WXF0 261 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms