RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ZCCHC24Q8N2G6 241 aaKnown RBP5.83□□□□□ -1.48
CNOT1-216ENST00000569240 JMJD8Q96S16 334 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 LINC00643Q86TS7 51 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 TTTY12Q9BZ98 90 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 SCN8AQ9UQD0 1980 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 IGHV1OR15-9A0A0B4J2B8 117 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 GNG5P63218 68 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 RPL39P5Q59GN2 51 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 SCN3AQ9NY46 2000 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 TRAV12-1A0A0B4J245 112 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 LOC101059948A0A1B0GTJ6 334 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 PYYP10082 97 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-216ENST00000569240 PDE4DIPQ5VU43 2346 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 NPIPB5A8MRT5 1133 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 FGF6P10767 208 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 PRSS12P56730 875 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 ZNF726P1Q15940 193 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 TRBV6-1A0A0K0K1D8 114 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 ETV2O00321 342 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-216ENST00000569240 NTF4P34130 210 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 GUSBP11Q6P575 273 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 Q6ZS52 159 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 NABP1Q96AH0 204 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 PATJQ8NI35 1801 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 CD33P20138 364 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 FOXF2Q12947 444 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 HS3ST6Q96QI5 342 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 COLQQ9Y215 455 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-216ENST00000569240 SAA2P0DJI9 122 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-216ENST00000569240 GPHA2Q96T91 129 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 SH2D1AO60880 128 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 LENEPQ9Y5L5 61 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 SPAG17Q6Q759 2223 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 hADV29S1A0JD25 119 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 H0YGX0 51 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 RHODO00212 210 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 Q8NFD4 153 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 SHANK2-AS3Q9BTD1 123 aa5.82□□□□□ -1.48
CNOT1-216ENST00000569240 TRAV8-3A0A0A6YYJ7 113 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 TGFAP01135 160 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 ECSCRQ19T08 205 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 IGKV1D-43A0A0B4J1Z2 117 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 IGKV1-12A0A0C4DH73 117 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 K7EM74 188 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 NTN3O00634 580 aaPredicted RBP5.81□□□□□ -1.48
CNOT1-216ENST00000569240 IGKV1D-12P01611 117 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 ZNF493Q6ZR52 646 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 NTN5Q8WTR8 489 aaPredicted RBP5.81□□□□□ -1.48
CNOT1-216ENST00000569240 C1orf147Q96MC9 270 aaPredicted RBP5.81□□□□□ -1.48
CNOT1-216ENST00000569240 CSRP2Q16527 193 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 VSIG2Q96IQ7 327 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 LOC102723996A0A087X1L8 192 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 TRAV40A0A0B4J280 105 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 NBR2O15453 112 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 CT55Q8WUE5 264 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 CARD19Q96LW7 228 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 FZR1Q9UM11 496 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 CKAP5Q14008 2032 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 TRPT1Q86TN4 253 aaKnown RBP5.81□□□□□ -1.48
CNOT1-216ENST00000569240 C1orf210Q8IVY1 113 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 HES7Q9BYE0 225 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 HERV-K104P63124 156 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 HAPLN4Q86UW8 402 aa5.81□□□□□ -1.48
CNOT1-216ENST00000569240 B9A039 149 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 IGHV3-13P01766 116 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 SPEM2Q0P670 501 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 RHOHQ15669 191 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 RALGAPA2Q2PPJ7 1873 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 SRRM5B3KS81 715 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 RNASE2P10153 161 aaKnown RBP5.8□□□□□ -1.48
CNOT1-216ENST00000569240 PDE6GP18545 87 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 MALP21145 153 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 C2orf66Q6UXQ4 117 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 C16orf47Q6ZP98 133 aaPredicted RBP5.8□□□□□ -1.48
CNOT1-216ENST00000569240 LCNL1Q6ZST4 164 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 TMEM219Q86XT9 240 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 LINC00479Q96M42 142 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 CHCHD2Q9Y6H1 151 aaPredicted RBP5.8□□□□□ -1.48
CNOT1-216ENST00000569240 LMO1P25800 156 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 TMEM240Q5SV17 173 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 PRADC1Q9BSG0 188 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 TRBV25-1A0A075B6N4 114 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 NDUFV3P56181 108 aaKnown RBP5.8□□□□□ -1.48
CNOT1-216ENST00000569240 PCOLCEQ15113 449 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 FAM74A4Q5TZK3 123 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 PTH2Q96A98 100 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 SMIM2Q9BVW6 85 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 TDRD6O60522 2096 aaKnown RBP5.8□□□□□ -1.48
CNOT1-216ENST00000569240 PAPPA2Q9BXP8 1791 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 TRBV10-2A0A0K0K1G8 114 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 CSRP1P21291 193 aaKnown RBP5.8□□□□□ -1.48
CNOT1-216ENST00000569240 C20orf173Q96LM9 149 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 SRXN1Q9BYN0 137 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 PEMTQ9UBM1 199 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 RBBP6Q7Z6E9 1792 aaKnown RBP5.8□□□□□ -1.48
CNOT1-216ENST00000569240 IGHV3OR15-7A0A075B7D8 119 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 PRSS29PA6NIE9 313 aa5.8□□□□□ -1.48
CNOT1-216ENST00000569240 NDUFS7O75251 213 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms