RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 CTDSP2O14595 271 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 IGLC1P0CG04 106 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 RFX2P48378 723 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 BCAP31P51572 246 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 C4orf46Q504U0 113 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 PHLDA2Q53GA4 152 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 RNASE12Q5GAN4 147 aaKnown RBP8.05□□□□□ -1.12
CLK3-222ENST00000568232 IQCF2Q8IXL9 164 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 OR5H6Q8NGV6 325 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 COQ8AQ8NI60 647 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 MRGPRFQ96AM1 343 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 ZNF2Q9BSG1 426 aaPredicted RBP8.05□□□□□ -1.12
CLK3-222ENST00000568232 EHFQ9NZC4 300 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 KLK11Q9UBX7 282 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 FAT3Q8TDW7 4589 aa8.05□□□□□ -1.12
CLK3-222ENST00000568232 TRAV30A0A087WSZ9 112 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 A0A0J9YX75 114 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 NOTOA8MTQ0 251 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 CORTO00230 105 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 SOCS3O14543 225 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 SCGB2A1O75556 95 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 ELK1P19419 428 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 ID1P41134 155 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 PAX9P55771 341 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 SCAND1P57086 179 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 MZT2BQ6NZ67 158 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 EBLN2Q6P2I7 272 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 SFXN4Q6P4A7 337 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 DHRS11Q6UWP2 260 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 AMTNQ6UX39 209 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 CMTM1Q8IZ96 169 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 SLC35G3Q8N808 338 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 RXFP4Q8TDU9 374 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 ABHD1Q96SE0 405 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 FXYD6Q9H0Q3 95 aa8.04□□□□□ -1.12
CLK3-222ENST00000568232 M0R2Z0 102 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 GPR31O00270 319 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 CRXO43186 299 aaPredicted RBP8.03□□□□□ -1.12
CLK3-222ENST00000568232 SCGNO76038 276 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 TSPOP30536 169 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 OR10J1P30954 320 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 PSMB3P49720 205 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 RND2P52198 227 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 SUB1P53999 127 aaKnown RBP eCLIP8.03□□□□□ -1.12
CLK3-222ENST00000568232 YPEL3P61236 119 aaPredicted RBP8.03□□□□□ -1.12
CLK3-222ENST00000568232 SPINK13Q1W4C9 94 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 OR1S2Q8NGQ3 325 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 OR6F1Q8NGZ6 308 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 GPR146Q96CH1 333 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 C20orf173Q96LM9 149 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 SRRQ9GZT4 340 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 RHBDL2Q9NX52 303 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 DNAH8Q96JB1 4490 aa8.03□□□□□ -1.12
CLK3-222ENST00000568232 A0A0B4J293 547 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 INS-IGF2F8WCM5 200 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 PMP2P02689 132 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 INPP1P49441 399 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 ASAH1Q13510 395 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 PYDC2Q56P42 97 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 IDNKQ5T6J7 187 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 SPATA31B1PQ5VZV4 182 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 TRIQKQ629K1 86 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 PRSS54Q6PEW0 395 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 TBC1D26Q86UD7 250 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 BAP18Q8IXM2 172 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 OR51G1Q8NGK1 321 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 SLC25A38Q96DW6 304 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 SOSTQ9BQB4 213 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 FAM30AQ9NZY2 134 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 COMMD3Q9UBI1 195 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 V9GYH0 126 aa8.02□□□□□ -1.13
CLK3-222ENST00000568232 hCG_2014768A0A024R1R8 64 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 CENPXA8MT69 81 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 FAM25AB3EWG3 89 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 FAM25CB3EWG5 89 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 FAM25GB3EWG6 89 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 GSTZ1O43708 216 aaPredicted RBP8.01□□□□□ -1.13
CLK3-222ENST00000568232 NXPH3O95157 252 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 IL7P13232 177 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 HTN1P15515 57 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 M6PRP20645 277 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 HOXA5P20719 270 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 IFITM3Q01628 133 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 DEFB104AQ8WTQ1 72 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 CHAC2Q8WUX2 184 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 AUNIPQ9H7T9 357 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 DOK5Q9P104 306 aa8.01□□□□□ -1.13
CLK3-222ENST00000568232 TRAV12-2A0A075B6T6 113 aa8□□□□□ -1.13
CLK3-222ENST00000568232 A8MTW9 85 aa8□□□□□ -1.13
CLK3-222ENST00000568232 SIVA1O15304 175 aa8□□□□□ -1.13
CLK3-222ENST00000568232 INSP01308 110 aa8□□□□□ -1.13
CLK3-222ENST00000568232 IGKV1-5P01602 117 aa8□□□□□ -1.13
CLK3-222ENST00000568232 PLA2G1BP04054 148 aaKnown RBP8□□□□□ -1.13
CLK3-222ENST00000568232 RD3LP0DJH9 198 aa8□□□□□ -1.13
CLK3-222ENST00000568232 MRPS10P82664 201 aaKnown RBP8□□□□□ -1.13
CLK3-222ENST00000568232 IL18Q14116 193 aa8□□□□□ -1.13
CLK3-222ENST00000568232 BSXQ3C1V8 233 aa8□□□□□ -1.13
CLK3-222ENST00000568232 OR11H7Q8NGC8 314 aa8□□□□□ -1.13
CLK3-222ENST00000568232 DEDD2Q8WXF8 326 aa8□□□□□ -1.13
CLK3-222ENST00000568232 NPIPB3Q92617 1050 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms