RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 LYZL1Q6UWQ5 148 aa10.2□□□□□ -0.78
CSPG4P13-202ENST00000567704 Q6P435 159 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 CHTOPQ9Y3Y2 248 aaKnown RBP10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 ZSWIM8A7E2V4 1837 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 PMS2P5A8MQ11 134 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 F2Z2F3 143 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 K7EP13 123 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 SMAD7O15105 426 aaKnown RBP10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 PPP1R17O96001 155 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 C8orf46Q8TAG6 207 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 SLC25A2Q9BXI2 301 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 SPTAN1Q13813 2472 aaKnown RBP10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 KIR2DL5BA0A0G2JN68 375 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 KIR2DL5BA0A0G2JPC4 375 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 SPINK8P0C7L1 97 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 CSRP1P21291 193 aaKnown RBP10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 GGNQ86UU5 652 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 KIR2DL5AQ8N109 375 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 LOC102723996A0A087X1L8 192 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 CEACAM8P31997 349 aaPredicted RBP10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 SLAQ13239 276 aa10.19□□□□□ -0.78
CSPG4P13-202ENST00000567704 PINLYPA6NC86 204 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 CD24P25063 80 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 SMPXQ9UHP9 88 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 TRAV2A0A0B4J234 112 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 PSMB11A5LHX3 300 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 IFI27P40305 119 aaPredicted RBP10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 SUMO2P61956 95 aaKnown RBP10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 KLF17Q5JT82 389 aaPredicted RBP10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 WDR81Q562E7 1941 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 IGKV1-39P01597 117 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 IGKV1D-39P04432 117 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 FAM27E3Q08E93 113 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 ASCL2Q99929 193 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 SCRT1Q9BWW7 348 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 MRPS18CQ9Y3D5 142 aaKnown RBP10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 PLXND1Q9Y4D7 1925 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 CCL25O15444 150 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 COA6Q5JTJ3 125 aaKnown RBP10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 HAPLN4Q86UW8 402 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 PPP1R27Q86WC6 154 aa10.18□□□□□ -0.78
CSPG4P13-202ENST00000567704 TSC2P49815 1807 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 IGHV2-26A0A0B4J1V2 119 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 IGLV3-19P01714 112 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 ATP5G2Q06055 141 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 TDRG1Q3Y452 100 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 RCHY1Q96PM5 261 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 V9GYV3 84 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 NBASA2RRP1 2371 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 TRAV12-3A0A0B4J271 114 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 FOXC1Q12948 553 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 CHAC1Q9BUX1 264 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 TSSC4Q9Y5U2 329 aaPredicted RBP10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 TRAV8-4A0A0B4J246 113 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 DPM3Q9P2X0 92 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 SMKR1H3BMG3 65 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 ETDBQ3ZM63 59 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 AMN1Q8IY45 258 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 EEF1AKMT3Q96AZ1 226 aa10.17□□□□□ -0.78
CSPG4P13-202ENST00000567704 H3BRM9 83 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 CEACAM4O75871 244 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 LCNL1Q6ZST4 164 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 ZCCHC24Q8N2G6 241 aaKnown RBP10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 VWA8A3KMH1 1905 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 C9orf118A6NHY6 69 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 NUPR1O60356 82 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 CDKN1BP46527 198 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 PVRIGQ6DKI7 326 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 DLX4Q92988 240 aaPredicted RBP10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 TCF20Q9UGU0 1960 aaKnown RBP10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 ORMDL2Q53FV1 153 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 C1orf162Q8NEQ5 155 aaPredicted RBP10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 COPS9Q8WXC6 57 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 IGKV2-40A0A087WW87 121 aaPredicted RBP10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 MMP23AO75900 390 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 IGKV2D-40P01614 121 aaPredicted RBP10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 CD177Q8N6Q3 437 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 OR13C6PQ8NH95 151 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
CSPG4P13-202ENST00000567704 IGKV3OR2-268A0A0C4DH90 116 aa10.15□□□□□ -0.78
CSPG4P13-202ENST00000567704 RPUSD1Q9UJJ7 312 aaKnown RBP10.15□□□□□ -0.78
CSPG4P13-202ENST00000567704 ARMS2P0C7Q2 107 aa10.15□□□□□ -0.78
CSPG4P13-202ENST00000567704 ZNF329Q86UD4 541 aa10.15□□□□□ -0.78
CSPG4P13-202ENST00000567704 DDB2Q92466 427 aa10.15□□□□□ -0.78
CSPG4P13-202ENST00000567704 IGHV3OR16-12A0A075B7B8 117 aa10.15□□□□□ -0.79
CSPG4P13-202ENST00000567704 SRRM5B3KS81 715 aa10.15□□□□□ -0.79
CSPG4P13-202ENST00000567704 RPL15P61313 204 aaKnown RBP10.15□□□□□ -0.79
CSPG4P13-202ENST00000567704 LAGE3Q14657 143 aa10.15□□□□□ -0.79
CSPG4P13-202ENST00000567704 SLC25A39Q9BZJ4 359 aaPredicted RBP10.15□□□□□ -0.79
CSPG4P13-202ENST00000567704 C9orf106Q8NAJ2 232 aa10.14□□□□□ -0.79
CSPG4P13-202ENST00000567704 FDCSPQ8NFU4 85 aa10.14□□□□□ -0.79
CSPG4P13-202ENST00000567704 NCOR1P1Q9H4R4 102 aa10.14□□□□□ -0.79
CSPG4P13-202ENST00000567704 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
CSPG4P13-202ENST00000567704 ZNF407Q9C0G0 2248 aa10.14□□□□□ -0.79
CSPG4P13-202ENST00000567704 BVES-AS1Q5T3Y7 98 aa10.14□□□□□ -0.79
CSPG4P13-202ENST00000567704 ARPC1AQ92747 370 aa10.14□□□□□ -0.79
CSPG4P13-202ENST00000567704 PYGO2Q9BRQ0 406 aa10.14□□□□□ -0.79
CSPG4P13-202ENST00000567704 PRR19A6NJB7 356 aa10.14□□□□□ -0.79
CSPG4P13-202ENST00000567704 TMEM155Q4W5P6 130 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms