RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 ARPC1AQ92747 370 aa14.77□□□□□ -0.05
MSLN-207ENST00000566549 SRSF8Q9BRL6 282 aaKnown RBP14.77□□□□□ -0.05
MSLN-207ENST00000566549 GNB1LQ9BYB4 327 aa14.77□□□□□ -0.05
MSLN-207ENST00000566549 BPESC1Q9GZL8 116 aa14.77□□□□□ -0.05
MSLN-207ENST00000566549 TRAV8-1A0A0A6YYK1 113 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 A6NNC1 897 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 SERF1AO75920 110 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 CD33P20138 364 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 LINC00310P59036 64 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 PRR31Q5SQ13 230 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 CCDC144NLQ6NUI1 221 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 BAGE3Q86Y29 109 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 ATG101Q9BSB4 218 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 TMEM11P17152 192 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 BCL6BQ8N143 479 aaPredicted RBP14.76□□□□□ -0.05
MSLN-207ENST00000566549 C5orf17Q8NAS9 161 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 C17orf77Q96MU5 243 aa14.76□□□□□ -0.05
MSLN-207ENST00000566549 TCRAP04437 139 aa14.75□□□□□ -0.05
MSLN-207ENST00000566549 SFTPCP11686 197 aa14.75□□□□□ -0.05
MSLN-207ENST00000566549 EFNA4P52798 201 aa14.75□□□□□ -0.05
MSLN-207ENST00000566549 MRPL27Q9P0M9 148 aaKnown RBP14.75□□□□□ -0.05
MSLN-207ENST00000566549 GNG7O60262 68 aa14.75□□□□□ -0.05
MSLN-207ENST00000566549 ZNF562Q6V9R5 426 aa14.75□□□□□ -0.05
MSLN-207ENST00000566549 LINC00322Q6ZN03 302 aaPredicted RBP14.75□□□□□ -0.05
MSLN-207ENST00000566549 FANCD2OSQ96PS1 177 aa14.75□□□□□ -0.05
MSLN-207ENST00000566549 SIRPDQ9H106 197 aa14.75□□□□□ -0.05
MSLN-207ENST00000566549 AMY1AP04745 511 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 RPL19P84098 196 aaKnown RBP14.74□□□□□ -0.05
MSLN-207ENST00000566549 FAM209BQ5JX69 171 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 FAM120AOSQ5T036 256 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 WDR73Q6P4I2 378 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 C1orf122Q6ZSJ8 110 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 Q71RC1 249 aaPredicted RBP14.74□□□□□ -0.05
MSLN-207ENST00000566549 GPR82Q96P67 336 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 C7orf69Q9H7B7 122 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 TRBV9A0A0B4J1U6 114 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 IZUMO1RA6ND01 250 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 FAM231DQ6ZW35 169 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 RNF125Q96EQ8 232 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 ASCL2Q99929 193 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 PIEZO1Q92508 2521 aa14.74□□□□□ -0.05
MSLN-207ENST00000566549 SCGB1D1O95968 90 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 Q56UQ5 140 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 ZNF491Q8N8L2 437 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 NUP35Q8NFH5 326 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 MBD6Q96DN6 1003 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 MS4A10Q96PG2 267 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 NEU1Q99519 415 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 GNB4Q9HAV0 340 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 IGHV2-70DA0A0C4DH43 119 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 HIST1H1EP10412 219 aaKnown RBP14.73□□□□□ -0.05
MSLN-207ENST00000566549 FCGR2BP31994 310 aaPredicted RBP14.73□□□□□ -0.05
MSLN-207ENST00000566549 USF2Q15853 346 aaPredicted RBP14.73□□□□□ -0.05
MSLN-207ENST00000566549 DNLZQ5SXM8 178 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 GOLT1AQ6ZVE7 132 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 GRAMD2BQ96HH9 432 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 ZNF331Q9NQX6 463 aaPredicted RBP14.73□□□□□ -0.05
MSLN-207ENST00000566549 KLF12Q9Y4X4 402 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 CFAP46Q8IYW2 2715 aa14.73□□□□□ -0.05
MSLN-207ENST00000566549 IGLV11-55A0A075B6I3 123 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 OR2J3O76001 311 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 Q8N6K4 173 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 SHANK2-AS3Q9BTD1 123 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 HIGD1CA8MV81 97 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 TSTD3H0UI37 97 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 MT-ND6P03923 174 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 SRIP30626 198 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 PKIAP61925 76 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 MINOS1Q5TGZ0 78 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 FMC1Q96HJ9 113 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 TMEM68Q96MH6 324 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 TBX15Q96SF7 602 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 MINOS1-NBL1R4GNA1 71 aa14.72□□□□□ -0.05
MSLN-207ENST00000566549 TOMM40O96008 361 aa14.71□□□□□ -0.05
MSLN-207ENST00000566549 SLAQ13239 276 aa14.71□□□□□ -0.05
MSLN-207ENST00000566549 TCF24Q7RTU0 167 aa14.71□□□□□ -0.05
MSLN-207ENST00000566549 BPIFA4PQ86YQ2 179 aa14.71□□□□□ -0.05
MSLN-207ENST00000566549 ZNF664Q8N3J9 261 aa14.71□□□□□ -0.05
MSLN-207ENST00000566549 MLST8Q9BVC4 326 aa14.71□□□□□ -0.05
MSLN-207ENST00000566549 OTORQ9NRC9 128 aa14.71□□□□□ -0.05
MSLN-207ENST00000566549 TMEM14CQ9P0S9 112 aa14.71□□□□□ -0.05
MSLN-207ENST00000566549 NPIPB5A8MRT5 1133 aa14.71□□□□□ -0.06
MSLN-207ENST00000566549 H3BRN7 92 aa14.71□□□□□ -0.06
MSLN-207ENST00000566549 BMPR1BO00238 502 aa14.71□□□□□ -0.06
MSLN-207ENST00000566549 NDUFB8O95169 186 aa14.71□□□□□ -0.06
MSLN-207ENST00000566549 LTAP01374 205 aa14.71□□□□□ -0.06
MSLN-207ENST00000566549 PRNTQ86SH4 94 aa14.71□□□□□ -0.06
MSLN-207ENST00000566549 OR2T8A6NH00 312 aa14.7□□□□□ -0.06
MSLN-207ENST00000566549 SH2D7A6NKC9 451 aaPredicted RBP14.7□□□□□ -0.06
MSLN-207ENST00000566549 APCSP02743 223 aa14.7□□□□□ -0.06
MSLN-207ENST00000566549 SAA4P35542 130 aa14.7□□□□□ -0.06
MSLN-207ENST00000566549 CAMPP49913 170 aa14.7□□□□□ -0.06
MSLN-207ENST00000566549 LMO4P61968 165 aa14.7□□□□□ -0.06
MSLN-207ENST00000566549 CIARTQ8N365 385 aaPredicted RBP14.7□□□□□ -0.06
MSLN-207ENST00000566549 OR4F17Q8NGA8 305 aa14.7□□□□□ -0.06
MSLN-207ENST00000566549 SSBP4Q9BWG4 385 aaPredicted RBP14.7□□□□□ -0.06
MSLN-207ENST00000566549 SAMD10Q9BYL1 202 aa14.7□□□□□ -0.06
MSLN-207ENST00000566549 CACNA1BQ00975 2339 aa14.7□□□□□ -0.06
MSLN-207ENST00000566549 IGHV3OR16-8A0A075B7F1 116 aa14.7□□□□□ -0.06
MSLN-207ENST00000566549 IGHV7-81A0A0B4J1V7 117 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms