RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SPART-AS1P0CW21 52 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 TNFSF8P32971 234 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 EMP1P54849 157 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 FXYD7P58549 80 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 AP3S2P59780 193 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 RPP30P78346 268 aaKnown RBP8.58□□□□□ -1.04
UBR1-206ENST00000566493 OR2F1Q13607 317 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 GDF5OSQ5U4N7 250 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 SAMD13Q5VXD3 122 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 SPATA31B1PQ5VZV4 182 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 EBLN2Q6P2I7 272 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 ZNF705AQ6ZN79 300 aaPredicted RBP8.58□□□□□ -1.04
UBR1-206ENST00000566493 OR8I2Q8N0Y5 310 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 OR4B1Q8NGF8 309 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 MCFD2Q8NI22 146 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 NEU1Q99519 415 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 WDR12Q9GZL7 423 aaKnown RBP8.58□□□□□ -1.04
UBR1-206ENST00000566493 IGKV1D-37A0A075B6S9 117 aa8.57□□□□□ -1.04
UBR1-206ENST00000566493 MED6O75586 246 aa8.57□□□□□ -1.04
UBR1-206ENST00000566493 CFDP00746 253 aaPredicted RBP8.57□□□□□ -1.04
UBR1-206ENST00000566493 IAPPP10997 89 aa8.57□□□□□ -1.04
UBR1-206ENST00000566493 VAMP1P23763 118 aa8.57□□□□□ -1.04
UBR1-206ENST00000566493 TMEM128Q5BJH2 165 aa8.57□□□□□ -1.04
UBR1-206ENST00000566493 LINC00336Q6ZUF6 198 aa8.57□□□□□ -1.04
UBR1-206ENST00000566493 TRGV9Q99603 122 aa8.57□□□□□ -1.04
UBR1-206ENST00000566493 SOSTQ9BQB4 213 aa8.57□□□□□ -1.04
UBR1-206ENST00000566493 GOLT1BQ9Y3E0 138 aa8.57□□□□□ -1.04
UBR1-206ENST00000566493 RFNGQ9Y644 331 aa8.57□□□□□ -1.04
UBR1-206ENST00000566493 TEX48A0A1B0GUV7 120 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 ZNF705FA8MVS1 300 aaPredicted RBP8.56□□□□□ -1.04
UBR1-206ENST00000566493 ISLRO14498 428 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 PITX3O75364 302 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 ZNF705DP0CH99 300 aaPredicted RBP8.56□□□□□ -1.04
UBR1-206ENST00000566493 ZNF705BP0CI00 300 aaPredicted RBP8.56□□□□□ -1.04
UBR1-206ENST00000566493 S100A7P31151 101 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 GALR1P47211 349 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 DEFB1P60022 68 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 PSG9Q00887 426 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 PYDC2Q56P42 97 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 GGNBP1Q5YKI7 109 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 TOMM5Q8N4H5 51 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 POM121L12Q8N7R1 296 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 C16orf92Q96LL3 132 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 CLUHP3Q96NS8 147 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 CIB3Q96Q77 187 aaPredicted RBP8.56□□□□□ -1.04
UBR1-206ENST00000566493 C7orf50Q9BRJ6 194 aaKnown RBP8.56□□□□□ -1.04
UBR1-206ENST00000566493 SLIRPQ9GZT3 109 aaKnown RBP8.56□□□□□ -1.04
UBR1-206ENST00000566493 RPRMQ9NS64 109 aa8.56□□□□□ -1.04
UBR1-206ENST00000566493 H3BMQ9 156 aa8.55□□□□□ -1.04
UBR1-206ENST00000566493 SLC25A6P12236 298 aa8.55□□□□□ -1.04
UBR1-206ENST00000566493 MEOX2P50222 304 aa8.55□□□□□ -1.04
UBR1-206ENST00000566493 THAP8Q8NA92 274 aa8.55□□□□□ -1.04
UBR1-206ENST00000566493 SLC25A21Q9BQT8 299 aaPredicted RBP8.55□□□□□ -1.04
UBR1-206ENST00000566493 TMED3Q9Y3Q3 217 aa8.55□□□□□ -1.04
UBR1-206ENST00000566493 HECTD4Q9Y4D8 3996 aa8.55□□□□□ -1.04
UBR1-206ENST00000566493 WRBO00258 174 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 SOCS3O14543 225 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 SYNGR2O43760 224 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 GHRHP01286 108 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 IFNA21P01568 189 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 HBE1P02100 147 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 PAX9P55771 341 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 ZNF79Q15937 498 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 FAM78BQ5VT40 261 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 UBE2DNLQ8IWF7 75 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 LRTM2Q8N967 370 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 ZNF709Q8N972 641 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 BPIFCQ8NFQ6 507 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 FAM210BQ96KR6 192 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 NIPSNAP3BQ9BS92 247 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 MAGT1Q9H0U3 335 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 SLC35B3Q9H1N7 401 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 SLC25A22Q9H936 323 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 HERC2O95714 4834 aa8.54□□□□□ -1.04
UBR1-206ENST00000566493 IGKV1OR2-108A0A075B7D4 117 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 A0A0J9YX75 114 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 F6UB75 175 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 M0R2N4 97 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 SFT2D2O95562 160 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 HOXB5P09067 269 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 ORM2P19652 201 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 S100A5P33763 92 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 AKR1C1Q04828 323 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 SPANXN5Q5MJ07 72 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 FAM222AQ5U5X8 452 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 DEDD2Q8WXF8 326 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 GPR82Q96P67 336 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 TMEM208Q9BTX3 173 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 RSG1Q9BU20 258 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 TMEM147Q9BVK8 224 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 SCRT1Q9BWW7 348 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 DKK2Q9UBU2 259 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 SLC45A2Q9UMX9 530 aa8.53□□□□□ -1.04
UBR1-206ENST00000566493 LOC102723971A0A1B0GUV8 181 aa8.52□□□□□ -1.05
UBR1-206ENST00000566493 ZNF98A6NK75 572 aa8.52□□□□□ -1.05
UBR1-206ENST00000566493 HTN3P15516 51 aa8.52□□□□□ -1.05
UBR1-206ENST00000566493 PPP1R1AQ13522 171 aa8.52□□□□□ -1.05
UBR1-206ENST00000566493 RRN3P1Q2M238 152 aa8.52□□□□□ -1.05
UBR1-206ENST00000566493 GSG1LQ6UXU4 331 aa8.52□□□□□ -1.05
UBR1-206ENST00000566493 OR4D5Q8NGN0 318 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms