RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 NAT8Q9UHE5 227 aa15.23■□□□□ 0.03
CLN6-205ENST00000564846 HOXA3O43365 443 aaPredicted RBP15.22■□□□□ 0.03
CLN6-205ENST00000564846 CD5LO43866 347 aa15.22■□□□□ 0.03
CLN6-205ENST00000564846 TRGV3P03979 118 aa15.22■□□□□ 0.03
CLN6-205ENST00000564846 ADMP35318 185 aa15.22■□□□□ 0.03
CLN6-205ENST00000564846 CCDC140Q96MF4 163 aa15.22■□□□□ 0.03
CLN6-205ENST00000564846 SHANK2-AS3Q9BTD1 123 aa15.22■□□□□ 0.03
CLN6-205ENST00000564846 CHRDL1Q9BU40 450 aa15.22■□□□□ 0.03
CLN6-205ENST00000564846 SDF2L1Q9HCN8 221 aa15.22■□□□□ 0.03
CLN6-205ENST00000564846 H3BRN7 92 aa15.21■□□□□ 0.03
CLN6-205ENST00000564846 TMEM241Q24JQ0 296 aa15.21■□□□□ 0.03
CLN6-205ENST00000564846 ZNF600Q6ZNG1 722 aa15.21■□□□□ 0.03
CLN6-205ENST00000564846 USMG5Q96IX5 58 aa15.21■□□□□ 0.03
CLN6-205ENST00000564846 TMEM14CQ9P0S9 112 aa15.21■□□□□ 0.03
CLN6-205ENST00000564846 CCDC168Q8NDH2 2452 aa15.21■□□□□ 0.03
CLN6-205ENST00000564846 B4DEV8 164 aa15.21■□□□□ 0.02
CLN6-205ENST00000564846 NDUFB4O95168 129 aa15.21■□□□□ 0.02
CLN6-205ENST00000564846 GP9P14770 177 aa15.21■□□□□ 0.02
CLN6-205ENST00000564846 TPPP2P59282 170 aa15.21■□□□□ 0.02
CLN6-205ENST00000564846 USF2Q15853 346 aaPredicted RBP15.21■□□□□ 0.02
CLN6-205ENST00000564846 TMEM88Q6PEY1 159 aa15.21■□□□□ 0.02
CLN6-205ENST00000564846 CLEC19AQ6UXS0 136 aa15.21■□□□□ 0.02
CLN6-205ENST00000564846 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.21■□□□□ 0.02
CLN6-205ENST00000564846 C11orf52Q96A22 123 aa15.21■□□□□ 0.02
CLN6-205ENST00000564846 CFHR3Q02985 330 aa15.2■□□□□ 0.02
CLN6-205ENST00000564846 KRTAP1-1Q07627 177 aa15.2■□□□□ 0.02
CLN6-205ENST00000564846 SMCO4Q9NRQ5 59 aa15.2■□□□□ 0.02
CLN6-205ENST00000564846 SCO2A0A1W2PP80 73 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 GGTLC3B5MD39 225 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 IGLV1-40P01703 118 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 S100A7P31151 101 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 SRP14P37108 136 aaKnown RBP15.19■□□□□ 0.02
CLN6-205ENST00000564846 LEMD1Q68G75 181 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 ZNF343Q6P1L6 599 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 CBLN2Q8IUK8 224 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 PRSS22Q9GZN4 317 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 NPFFR1Q9GZQ6 430 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 RNF24Q9Y225 148 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 TEX15Q9BXT5 2789 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 ITPR2Q14571 2701 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 TGOLN2O43493 480 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 NBEAP1P0C6P0 100 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 AKR1C3P42330 323 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 SUMO1P63165 101 aaKnown RBP15.19■□□□□ 0.02
CLN6-205ENST00000564846 SIGLECL1Q8N7X8 197 aa15.19■□□□□ 0.02
CLN6-205ENST00000564846 ZNF469Q96JG9 3925 aaPredicted RBP15.18■□□□□ 0.02
CLN6-205ENST00000564846 BMPR1BO00238 502 aa15.18■□□□□ 0.02
CLN6-205ENST00000564846 IL17RELQ6ZVW7 336 aa15.18■□□□□ 0.02
CLN6-205ENST00000564846 BPIFA4PQ86YQ2 179 aa15.18■□□□□ 0.02
CLN6-205ENST00000564846 A0A087WWC5 75 aa15.17■□□□□ 0.02
CLN6-205ENST00000564846 PF4V1P10720 104 aa15.17■□□□□ 0.02
CLN6-205ENST00000564846 RELQ04864 619 aaPredicted RBP15.17■□□□□ 0.02
CLN6-205ENST00000564846 TMEM86BQ8N661 226 aa15.17■□□□□ 0.02
CLN6-205ENST00000564846 TCEAL7Q9BRU2 100 aa15.17■□□□□ 0.02
CLN6-205ENST00000564846 GNB4Q9HAV0 340 aa15.17■□□□□ 0.02
CLN6-205ENST00000564846 A0A0G2JLM5 398 aa15.16■□□□□ 0.02
CLN6-205ENST00000564846 ZNF98A6NK75 572 aa15.16■□□□□ 0.02
CLN6-205ENST00000564846 HIST1H1EP10412 219 aaKnown RBP15.16■□□□□ 0.02
CLN6-205ENST00000564846 TOMM20LQ6UXN7 152 aa15.16■□□□□ 0.02
CLN6-205ENST00000564846 DERL1Q9BUN8 251 aa15.16■□□□□ 0.02
CLN6-205ENST00000564846 TUBA4BQ9H853 241 aa15.16■□□□□ 0.02
CLN6-205ENST00000564846 YAE1D1Q9NRH1 226 aa15.16■□□□□ 0.02
CLN6-205ENST00000564846 RABAC1Q9UI14 185 aa15.16■□□□□ 0.02
CLN6-205ENST00000564846 TMEM89A2RUT3 159 aa15.16■□□□□ 0.02
CLN6-205ENST00000564846 IGHG4P01861 327 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 HNF1AP20823 631 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 CRYBB3P26998 211 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 MYCNOSP40205 109 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 RAB9AP51151 201 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 RPL23P62829 140 aaKnown RBP15.15■□□□□ 0.02
CLN6-205ENST00000564846 ADIRFQ15847 76 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 TMEM95Q3KNT9 176 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 OR4F17Q8NGA8 305 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 BLNKQ8WV28 456 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 ZNF414Q96IQ9 312 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 ELOVL1Q9BW60 279 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 KLK15Q9H2R5 256 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 ZFAND3Q9H8U3 227 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 PRELID1Q9Y255 219 aa15.15■□□□□ 0.02
CLN6-205ENST00000564846 FLNAP21333 2647 aaKnown RBP15.14■□□□□ 0.01
CLN6-205ENST00000564846 RANP62826 216 aaKnown RBP15.14■□□□□ 0.01
CLN6-205ENST00000564846 ZNF329Q86UD4 541 aa15.14■□□□□ 0.01
CLN6-205ENST00000564846 ZNF702PQ9H963 129 aa15.14■□□□□ 0.01
CLN6-205ENST00000564846 TMEM190Q8WZ59 177 aa15.13■□□□□ 0.01
CLN6-205ENST00000564846 FASNP49327 2511 aaKnown RBP15.13■□□□□ 0.01
CLN6-205ENST00000564846 HECTD1Q9ULT8 2610 aa15.13■□□□□ 0.01
CLN6-205ENST00000564846 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.13■□□□□ 0.01
CLN6-205ENST00000564846 IGHV3-35A0A0C4DH35 117 aa15.13■□□□□ 0.01
CLN6-205ENST00000564846 C9JCJ5 164 aa15.13■□□□□ 0.01
CLN6-205ENST00000564846 SNRPCP09234 159 aaKnown RBP15.13■□□□□ 0.01
CLN6-205ENST00000564846 IGLC2P0DOY2 106 aa15.13■□□□□ 0.01
CLN6-205ENST00000564846 PSMB8P28062 276 aa15.13■□□□□ 0.01
CLN6-205ENST00000564846 ARL3P36405 182 aa15.13■□□□□ 0.01
CLN6-205ENST00000564846 RPL35P42766 123 aaKnown RBP15.13■□□□□ 0.01
CLN6-205ENST00000564846 C2CD4CQ8TF44 421 aa15.13■□□□□ 0.01
CLN6-205ENST00000564846 ZNF586Q9NXT0 402 aa15.13■□□□□ 0.01
CLN6-205ENST00000564846 AKAP9Q99996 3911 aa15.12■□□□□ 0.01
CLN6-205ENST00000564846 HELTA6NFD8 242 aa15.12■□□□□ 0.01
CLN6-205ENST00000564846 TSPAN4O14817 238 aa15.12■□□□□ 0.01
CLN6-205ENST00000564846 MRPS12O15235 138 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms