RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 WFDC10BQ8IUB3 73 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 LYSMD2Q8IV50 215 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 PINX1Q96BK5 328 aaKnown RBP6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 VSIG2Q96IQ7 327 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 TSC22D3Q99576 134 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 ZNF2Q9BSG1 426 aaPredicted RBP6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 EHFQ9NZC4 300 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 KLK11Q9UBX7 282 aa6.75□□□□□ -1.33
HDGFL3-204ENST00000563790 A0A0B4J293 547 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 FAM90A26D6RGX4 464 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 GPR31O00270 319 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 CLN5O75503 358 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 IGKV1-5P01602 117 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 NPBWR1P48145 328 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 DEFB1P60022 68 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 HERV-K104P61576 105 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 SPINK9Q5DT21 86 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 GDF5OSQ5U4N7 250 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 C16orf54Q6UWD8 224 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 TMEM208Q9BTX3 173 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 SLC35B3Q9H1N7 401 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 TMEM231Q9H6L2 316 aa6.74□□□□□ -1.33
HDGFL3-204ENST00000563790 IGKV3-20P01619 116 aa6.73□□□□□ -1.33
HDGFL3-204ENST00000563790 CBX5P45973 191 aa6.73□□□□□ -1.33
HDGFL3-204ENST00000563790 KCTD21Q4G0X4 260 aa6.73□□□□□ -1.33
HDGFL3-204ENST00000563790 MORN5Q5VZ52 161 aa6.73□□□□□ -1.33
HDGFL3-204ENST00000563790 OR4X1Q8NH49 305 aa6.73□□□□□ -1.33
HDGFL3-204ENST00000563790 BORCS5Q969J3 196 aa6.73□□□□□ -1.33
HDGFL3-204ENST00000563790 MRGPRFQ96AM1 343 aa6.73□□□□□ -1.33
HDGFL3-204ENST00000563790 RCL1Q9Y2P8 373 aaKnown RBP6.73□□□□□ -1.33
HDGFL3-204ENST00000563790 LECT2O14960 151 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 CCNKO75909 580 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 NXPH3O95157 252 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 PMP2P02689 132 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 IGLC1P0CG04 106 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 RPL5P46777 297 aaKnown RBP6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 DHRS2Q13268 280 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 TIGITQ495A1 244 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 AARDQ4LEZ3 155 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 PHLDA2Q53GA4 152 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 TBC1D26Q86UD7 250 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 SPARTQ8N0X7 666 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 TMEM170AQ8WVE7 144 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 METTL26Q96S19 204 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 VCXQ9H320 206 aa6.72□□□□□ -1.33
HDGFL3-204ENST00000563790 A0A0G2JRQ6 117 aa6.71□□□□□ -1.34
HDGFL3-204ENST00000563790 SOCS3O14543 225 aa6.71□□□□□ -1.34
HDGFL3-204ENST00000563790 HRH1P35367 487 aa6.71□□□□□ -1.34
HDGFL3-204ENST00000563790 MXD1Q05195 221 aa6.71□□□□□ -1.34
HDGFL3-204ENST00000563790 KRTAP6-3Q3LI67 103 aa6.71□□□□□ -1.34
HDGFL3-204ENST00000563790 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.34
HDGFL3-204ENST00000563790 H2BFWTQ7Z2G1 175 aa6.71□□□□□ -1.34
HDGFL3-204ENST00000563790 OR4A16Q8NH70 328 aa6.71□□□□□ -1.34
HDGFL3-204ENST00000563790 Q9HAA7 133 aa6.71□□□□□ -1.34
HDGFL3-204ENST00000563790 RPH3ALQ9UNE2 315 aa6.71□□□□□ -1.34
HDGFL3-204ENST00000563790 A8MTW9 85 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 IBA57-AS1B1ANH7 110 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 BUB3O43684 328 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 AZU1P20160 251 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 UCP3P55916 312 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 GABARAPL2P60520 117 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 SNRPD3P62318 126 aaKnown RBP6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 ERHP84090 104 aaKnown RBP6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 ZNF79Q15937 498 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 IDNKQ5T6J7 187 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 PRSS54Q6PEW0 395 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 LINC00612Q8N6U2 182 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 NRN1Q9NPD7 142 aa6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 TIMM8BQ9Y5J9 83 aaPredicted RBP6.7□□□□□ -1.34
HDGFL3-204ENST00000563790 hCG_2014768A0A024R1R8 64 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 ANKRD65E5RJM6 399 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 CCSO14618 274 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 PSMB9P28065 219 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 TGFBR1P36897 503 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 ETV6P41212 452 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 NKX2-1P43699 371 aaPredicted RBP6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 PAX9P55771 341 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 TAS2R46P59540 309 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 TAS2R20P59543 309 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 YPEL3P61236 119 aaPredicted RBP6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 TSPAN14Q8NG11 270 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 OR5H2Q8NGV7 314 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 OR6F1Q8NGZ6 308 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 GPX8Q8TED1 209 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 TP53RKQ96S44 253 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 WDR12Q9GZL7 423 aaKnown RBP6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 DIABLOQ9NR28 239 aa6.69□□□□□ -1.34
HDGFL3-204ENST00000563790 TRAV26-2A0A0B4J265 109 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 CORTO00230 105 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 HNRNPCP07910 306 aaKnown RBP eCLIP6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 ELK1P19419 428 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 GATA2P23769 480 aaPredicted RBP6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 HLA-DMAP28067 261 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 SNCAP37840 140 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 RND3P61587 244 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 DHODHQ02127 395 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 AMTNQ6UX39 209 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 LHFPL1Q86WI0 220 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 IGF2BP2-AS1Q96M15 143 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms