RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 K7EP13 123 aa11.19□□□□□ -0.62
VPS9D1-202ENST00000561976 LIPFP07098 398 aa11.19□□□□□ -0.62
VPS9D1-202ENST00000561976 C3orf36Q3SXR2 165 aa11.19□□□□□ -0.62
VPS9D1-202ENST00000561976 TRGV9Q99603 122 aa11.19□□□□□ -0.62
VPS9D1-202ENST00000561976 FAM215AQ9Y5M1 114 aa11.19□□□□□ -0.62
VPS9D1-202ENST00000561976 ASPMQ8IZT6 3477 aa11.19□□□□□ -0.62
VPS9D1-202ENST00000561976 GP9P14770 177 aa11.19□□□□□ -0.62
VPS9D1-202ENST00000561976 CIARTQ8N365 385 aaPredicted RBP11.19□□□□□ -0.62
VPS9D1-202ENST00000561976 GSX1Q9H4S2 264 aaPredicted RBP11.19□□□□□ -0.62
VPS9D1-202ENST00000561976 C1RLQ9NZP8 487 aa11.19□□□□□ -0.62
VPS9D1-202ENST00000561976 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 HTR1DP28221 377 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 CEACAM8P31997 349 aaPredicted RBP11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 PRNTQ86SH4 94 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 ZADH2Q8N4Q0 377 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 SPENQ96T58 3664 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 TRAV30A0A087WSZ9 112 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 CBY3A6NI87 242 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 NDUFB3O43676 98 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 LYZP61626 148 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 CCL17Q92583 94 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 PMCHL2Q9BQD1 86 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 NDFIP1Q9BT67 221 aa11.18□□□□□ -0.62
VPS9D1-202ENST00000561976 ROS1P08922 2347 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 OR5AL1P0C617 328 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 BVES-AS1Q5T3Y7 98 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 C8orf46Q8TAG6 207 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 MUC21A0A0G2JKD1 596 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 MUC21A0A140T8X8 626 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 FCN3O75636 299 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 CRYGCP07315 174 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 MC5RP33032 325 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 RPL27AP46776 148 aaKnown RBP11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 MUC21Q5SSG8 566 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 C1orf185Q5T7R7 199 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 LYPD2Q6UXB3 125 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 GOLT1AQ6ZVE7 132 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 HSPB8Q9UJY1 196 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 HIGD1AQ9Y241 93 aa11.17□□□□□ -0.62
VPS9D1-202ENST00000561976 TAX1BP3O14907 124 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 PET117Q6UWS5 81 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 C12orf54Q6X4T0 127 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 Q86TA4 180 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 RNF24Q9Y225 148 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 C17orf100A8MU93 164 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 EXOC3-AS1Q8N2X6 119 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 TMEM116Q8NCL8 245 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 OR2T8A6NH00 312 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 CDKN1BP46527 198 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 LGALS7P47929 136 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 WFDC8Q8IUA0 241 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 SCRT2Q9NQ03 307 aa11.16□□□□□ -0.62
VPS9D1-202ENST00000561976 BOD1L1Q8NFC6 3051 aa11.15□□□□□ -0.62
VPS9D1-202ENST00000561976 FAM231BA6NCW3 169 aa11.15□□□□□ -0.62
VPS9D1-202ENST00000561976 HLA-DRB1P01911 266 aa11.15□□□□□ -0.62
VPS9D1-202ENST00000561976 TMEM108Q6UXF1 575 aa11.15□□□□□ -0.62
VPS9D1-202ENST00000561976 LINC00311Q8N616 119 aa11.15□□□□□ -0.62
VPS9D1-202ENST00000561976 OTORQ9NRC9 128 aa11.15□□□□□ -0.62
VPS9D1-202ENST00000561976 ABCA1O95477 2261 aa11.15□□□□□ -0.62
VPS9D1-202ENST00000561976 HAX1O00165 279 aa11.15□□□□□ -0.63
VPS9D1-202ENST00000561976 PRB4P10163 310 aaPredicted RBP11.15□□□□□ -0.63
VPS9D1-202ENST00000561976 CNTFRP26992 372 aa11.15□□□□□ -0.63
VPS9D1-202ENST00000561976 MRGPRG-AS1Q2M3A8 158 aa11.15□□□□□ -0.63
VPS9D1-202ENST00000561976 SRSF12Q8WXF0 261 aaKnown RBP11.15□□□□□ -0.63
VPS9D1-202ENST00000561976 CFAP47Q6ZTR5 3102 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 A0A087X0K7 114 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 M0R296 226 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 Q71RC1 249 aaPredicted RBP11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 DEFB125Q8N687 156 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 NUP37Q8NFH4 326 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 A0A1B0GUT8 65 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 NPIPB6E9PJ23 425 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 TMEM178BH3BS89 294 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 APOHP02749 345 aaPredicted RBP11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 PSG1P11464 419 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 ADIPOQQ15848 244 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 ASCL2Q99929 193 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 TPPP3Q9BW30 176 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 MS4A6AQ9H2W1 248 aa11.14□□□□□ -0.63
VPS9D1-202ENST00000561976 RBP4P02753 201 aa11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 AMMECR1LQ6DCA0 310 aa11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 TEX45Q8NA69 505 aa11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 SLC25A39Q9BZJ4 359 aaPredicted RBP11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 AP5S1Q9NUS5 200 aa11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 SPAARA0A1B0GVQ0 90 aa11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 ARMS2P0C7Q2 107 aa11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 ARF6P62330 175 aa11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 RIGQ13278 110 aa11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 C16orf54Q6UWD8 224 aa11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 PRSS3P2Q8NHM4 247 aa11.13□□□□□ -0.63
VPS9D1-202ENST00000561976 MAP1BP46821 2468 aaKnown RBP11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 TMEM238LA0A1B0GVL6 79 aa11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 SNAI2O43623 268 aa11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 PLP1P60201 277 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms