RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SNRPGP15A8MWD9 76 aa18.27■□□□□ 0.52
NME3-202ENST00000561637 IGKV3-20P01619 116 aa18.27■□□□□ 0.52
NME3-202ENST00000561637 OR4E1P0C645 316 aa18.27■□□□□ 0.52
NME3-202ENST00000561637 IL7P13232 177 aa18.27■□□□□ 0.52
NME3-202ENST00000561637 FXYD7P58549 80 aa18.27■□□□□ 0.52
NME3-202ENST00000561637 C17orf77Q96MU5 243 aa18.27■□□□□ 0.52
NME3-202ENST00000561637 LINC00052Q96N35 136 aa18.27■□□□□ 0.52
NME3-202ENST00000561637 HLA-DRB4P13762 266 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 PRR20EP86478 221 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 PRR20CP86479 221 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 PRR20DP86480 221 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 PRR20BP86481 221 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 PRR20AP86496 221 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 ID3Q02535 119 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 OR4D5Q8NGN0 318 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 PPP1R14BQ96C90 147 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 TBC1D24Q9ULP9 559 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 HLA-DRB4X5D2U9 266 aa18.26■□□□□ 0.51
NME3-202ENST00000561637 SSSCA1O60232 199 aa18.25■□□□□ 0.51
NME3-202ENST00000561637 MFFQ9GZY8 342 aa18.25■□□□□ 0.51
NME3-202ENST00000561637 SLC25A32Q9H2D1 315 aa18.25■□□□□ 0.51
NME3-202ENST00000561637 SEPSECSQ9HD40 501 aaKnown RBP18.25■□□□□ 0.51
NME3-202ENST00000561637 CELA1Q9UNI1 258 aa18.25■□□□□ 0.51
NME3-202ENST00000561637 STRAPQ9Y3F4 350 aaKnown RBP18.25■□□□□ 0.51
NME3-202ENST00000561637 F6UB75 175 aa18.24■□□□□ 0.51
NME3-202ENST00000561637 FABP1P07148 127 aa18.24■□□□□ 0.51
NME3-202ENST00000561637 NUP62P37198 522 aaPredicted RBP18.24■□□□□ 0.51
NME3-202ENST00000561637 NKX2-1P43699 371 aaPredicted RBP18.24■□□□□ 0.51
NME3-202ENST00000561637 AKR1C1Q04828 323 aa18.24■□□□□ 0.51
NME3-202ENST00000561637 C4orf46Q504U0 113 aa18.24■□□□□ 0.51
NME3-202ENST00000561637 TMEM41BQ5BJD5 291 aa18.24■□□□□ 0.51
NME3-202ENST00000561637 C20orf173Q96LM9 149 aa18.24■□□□□ 0.51
NME3-202ENST00000561637 PMS2P5A8MQ11 134 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 PLA2G10O15496 165 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 MIFP14174 115 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 HLA-DMBP28068 263 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 PAX9P55771 341 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 C1orf194Q5T5A4 169 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 ZNF767PQ75MW2 155 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 OR8I2Q8N0Y5 310 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 COQ8AQ8NI60 647 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 SLC25A22Q9H936 323 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 PSENENQ9NZ42 101 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 PKHD1P08F94 4074 aa18.23■□□□□ 0.51
NME3-202ENST00000561637 ORM2P19652 201 aa18.22■□□□□ 0.51
NME3-202ENST00000561637 RPP30P78346 268 aaKnown RBP18.22■□□□□ 0.51
NME3-202ENST00000561637 Q6ZTC4 211 aa18.22■□□□□ 0.51
NME3-202ENST00000561637 DOK5Q9P104 306 aa18.22■□□□□ 0.51
NME3-202ENST00000561637 MUC4Q99102 2169 aa18.22■□□□□ 0.51
NME3-202ENST00000561637 FAT2Q9NYQ8 4349 aa18.22■□□□□ 0.51
NME3-202ENST00000561637 SMCO3A2RU48 225 aa18.21■□□□□ 0.51
NME3-202ENST00000561637 SCGB1D2O95969 90 aa18.21■□□□□ 0.51
NME3-202ENST00000561637 SAV1Q9H4B6 383 aaPredicted RBP18.21■□□□□ 0.51
NME3-202ENST00000561637 PFDN2Q9UHV9 154 aa18.21■□□□□ 0.51
NME3-202ENST00000561637 ZNF98A6NK75 572 aa18.2■□□□□ 0.5
NME3-202ENST00000561637 PSMB3P49720 205 aa18.2■□□□□ 0.5
NME3-202ENST00000561637 RRAS2P62070 204 aaPredicted RBP18.2■□□□□ 0.5
NME3-202ENST00000561637 SCRT1Q9BWW7 348 aa18.2■□□□□ 0.5
NME3-202ENST00000561637 CCSO14618 274 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 IFNA21P01568 189 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 IAH1Q2TAA2 248 aaPredicted RBP18.19■□□□□ 0.5
NME3-202ENST00000561637 IGFL4Q6B9Z1 124 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 FOXI2Q6ZQN5 318 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 ZNF709Q8N972 641 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 ZBTB8BQ8NAP8 495 aaPredicted RBP18.19■□□□□ 0.5
NME3-202ENST00000561637 BPIFCQ8NFQ6 507 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 OR1B1Q8NGR6 318 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 C2CD4CQ8TF44 421 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 RSG1Q9BU20 258 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 SLC35B3Q9H1N7 401 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 HRH4Q9H3N8 390 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 DNAH2Q9P225 4427 aa18.19■□□□□ 0.5
NME3-202ENST00000561637 RCL1Q9Y2P8 373 aaKnown RBP18.19■□□□□ 0.5
NME3-202ENST00000561637 CENPXA8MT69 81 aa18.18■□□□□ 0.5
NME3-202ENST00000561637 METTL15P1P0C7V9 234 aa18.18■□□□□ 0.5
NME3-202ENST00000561637 ID1P41134 155 aa18.18■□□□□ 0.5
NME3-202ENST00000561637 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.18■□□□□ 0.5
NME3-202ENST00000561637 CYP2G1PQ6ZSU1 146 aa18.18■□□□□ 0.5
NME3-202ENST00000561637 TMEM144Q7Z5S9 345 aa18.18■□□□□ 0.5
NME3-202ENST00000561637 OR4B1Q8NGF8 309 aa18.18■□□□□ 0.5
NME3-202ENST00000561637 SMIM8Q96KF7 97 aa18.18■□□□□ 0.5
NME3-202ENST00000561637 C7orf50Q9BRJ6 194 aaKnown RBP18.18■□□□□ 0.5
NME3-202ENST00000561637 C20orf85Q9H1P6 137 aa18.18■□□□□ 0.5
NME3-202ENST00000561637 IGLL5B9A064 214 aa18.17■□□□□ 0.5
NME3-202ENST00000561637 ARL16Q0P5N6 197 aa18.17■□□□□ 0.5
NME3-202ENST00000561637 TMEM14EPQ6UXP3 125 aa18.17■□□□□ 0.5
NME3-202ENST00000561637 MITD1Q8WV92 249 aa18.17■□□□□ 0.5
NME3-202ENST00000561637 GSKIPQ9P0R6 139 aa18.17■□□□□ 0.5
NME3-202ENST00000561637 APLNQ9ULZ1 77 aa18.17■□□□□ 0.5
NME3-202ENST00000561637 ISLRO14498 428 aa18.16■□□□□ 0.5
NME3-202ENST00000561637 C12orf74Q32Q52 190 aa18.16■□□□□ 0.5
NME3-202ENST00000561637 IGHV3OR16-12A0A075B7B8 117 aa18.15■□□□□ 0.5
NME3-202ENST00000561637 LYRM1O43325 122 aa18.15■□□□□ 0.5
NME3-202ENST00000561637 PRB4P10163 310 aaPredicted RBP18.15■□□□□ 0.5
NME3-202ENST00000561637 NUTF2P61970 127 aaKnown RBP18.15■□□□□ 0.5
NME3-202ENST00000561637 FAM78BQ5VT40 261 aa18.15■□□□□ 0.5
NME3-202ENST00000561637 ZNF705AQ6ZN79 300 aaPredicted RBP18.15■□□□□ 0.5
NME3-202ENST00000561637 C16orf92Q96LL3 132 aa18.15■□□□□ 0.5
NME3-202ENST00000561637 SEC22CQ9BRL7 303 aa18.15■□□□□ 0.5
NME3-202ENST00000561637 TMEM147Q9BVK8 224 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms