RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
CCDC113-203ENST00000561517 METTL15P1P0C7V9 234 aa11.32□□□□□ -0.6
CCDC113-203ENST00000561517 SNRPD3P62318 126 aaKnown RBP11.32□□□□□ -0.6
CCDC113-203ENST00000561517 EWSR1Q01844 656 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC113-203ENST00000561517 TMEM182Q6ZP80 229 aaPredicted RBP11.32□□□□□ -0.6
CCDC113-203ENST00000561517 IL5P05113 134 aa11.31□□□□□ -0.6
CCDC113-203ENST00000561517 SPP1P10451 314 aa11.31□□□□□ -0.6
CCDC113-203ENST00000561517 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
CCDC113-203ENST00000561517 TMEM41BQ5BJD5 291 aa11.31□□□□□ -0.6
CCDC113-203ENST00000561517 ACTL10Q5JWF8 245 aa11.31□□□□□ -0.6
CCDC113-203ENST00000561517 MORN3Q6PF18 240 aaPredicted RBP11.31□□□□□ -0.6
CCDC113-203ENST00000561517 OR10P1Q8NGE3 313 aa11.31□□□□□ -0.6
CCDC113-203ENST00000561517 PPP1R14BQ96C90 147 aa11.31□□□□□ -0.6
CCDC113-203ENST00000561517 RARRES2Q99969 163 aa11.31□□□□□ -0.6
CCDC113-203ENST00000561517 LCE6AA0A183 80 aa11.3□□□□□ -0.6
CCDC113-203ENST00000561517 SMCO3A2RU48 225 aa11.3□□□□□ -0.6
CCDC113-203ENST00000561517 SOCS3O14543 225 aa11.3□□□□□ -0.6
CCDC113-203ENST00000561517 IFITM3Q01628 133 aa11.3□□□□□ -0.6
CCDC113-203ENST00000561517 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
CCDC113-203ENST00000561517 OR8I2Q8N0Y5 310 aa11.3□□□□□ -0.6
CCDC113-203ENST00000561517 OR11H2Q8NH07 326 aa11.3□□□□□ -0.6
CCDC113-203ENST00000561517 C2orf50Q96LR7 162 aa11.3□□□□□ -0.6
CCDC113-203ENST00000561517 C11orf1Q9H5F2 150 aa11.3□□□□□ -0.6
CCDC113-203ENST00000561517 NPVFQ9HCQ7 196 aa11.3□□□□□ -0.6
CCDC113-203ENST00000561517 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 ZNF98A6NK75 572 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 FAM25EA8MYX2 175 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 K7EPK0 472 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 ORM2P19652 201 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 PLP1P60201 277 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 RRAS2P62070 204 aaPredicted RBP11.29□□□□□ -0.6
CCDC113-203ENST00000561517 SELENOTP62341 195 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 ARL16Q0P5N6 197 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 IL15RAQ13261 267 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 TMEM217Q8N7C4 229 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 GGACTQ9BVM4 153 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 BATF3Q9NR55 127 aa11.29□□□□□ -0.6
CCDC113-203ENST00000561517 H3BMM0 161 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 DEDDO75618 318 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 C4BPBP20851 252 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 S100A7P31151 101 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 ID1P41134 155 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 PSMB3P49720 205 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 OR1B1Q8NGR6 318 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 ENKURQ8TC29 256 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 TMEM147Q9BVK8 224 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 SLC25A32Q9H2D1 315 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 C11orf68Q9H3H3 251 aaKnown RBP11.28□□□□□ -0.6
CCDC113-203ENST00000561517 MGAT4CQ9UBM8 478 aa11.28□□□□□ -0.6
CCDC113-203ENST00000561517 LSM5Q9Y4Y9 91 aaKnown RBP11.28□□□□□ -0.6
CCDC113-203ENST00000561517 LYSTQ99698 3801 aa11.27□□□□□ -0.6
CCDC113-203ENST00000561517 H3BRN7 92 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 L7N2F9 121 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 ISLRO14498 428 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 GALR1P47211 349 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 MEOX2P50222 304 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 VAMP2P63027 116 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 SAMD13Q5VXD3 122 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 TEPPQ6URK8 271 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 GSG1LQ6UXU4 331 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 CSNK1G2-AS1Q8NCQ2 148 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 C17orf77Q96MU5 243 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 GPR82Q96P67 336 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
CCDC113-203ENST00000561517 LINC00869P0C866 280 aa11.26□□□□□ -0.61
CCDC113-203ENST00000561517 SHANK2-AS3Q9BTD1 123 aa11.26□□□□□ -0.61
CCDC113-203ENST00000561517 SLC25A39Q9BZJ4 359 aaPredicted RBP11.26□□□□□ -0.61
CCDC113-203ENST00000561517 SLC25A22Q9H936 323 aa11.26□□□□□ -0.61
CCDC113-203ENST00000561517 GPN1Q9HCN4 374 aaPredicted RBP11.26□□□□□ -0.61
CCDC113-203ENST00000561517 HIGD1AQ9Y241 93 aa11.26□□□□□ -0.61
CCDC113-203ENST00000561517 SACSQ9NZJ4 4579 aa11.26□□□□□ -0.61
CCDC113-203ENST00000561517 RYR2Q92736 4967 aa11.26□□□□□ -0.61
CCDC113-203ENST00000561517 ZNF705EA8MWA4 302 aaPredicted RBP11.25□□□□□ -0.61
CCDC113-203ENST00000561517 HYPMO75409 117 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 RAP2BP61225 183 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
CCDC113-203ENST00000561517 RAB32Q13637 225 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 GDF5OSQ5U4N7 250 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 FOXI2Q6ZQN5 318 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 NRARPQ7Z6K4 114 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 Q8NAQ8 132 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 LINC00052Q96N35 136 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 RSG1Q9BU20 258 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 SCRT1Q9BWW7 348 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 SAV1Q9H4B6 383 aaPredicted RBP11.25□□□□□ -0.61
CCDC113-203ENST00000561517 DOK5Q9P104 306 aa11.25□□□□□ -0.61
CCDC113-203ENST00000561517 CXorf65A6NEN9 183 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 NUPR2A6NF83 97 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 FAM24AA6NFZ4 105 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 PRAF2O60831 178 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 PVALBP20472 110 aaPredicted RBP11.24□□□□□ -0.61
CCDC113-203ENST00000561517 BCAP31P51572 246 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 CAV2P51636 162 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 DEFB1P60022 68 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 SLC38A11Q08AI6 406 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 PMS2P11Q13670 270 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 PXDC1Q5TGL8 231 aa11.24□□□□□ -0.61
CCDC113-203ENST00000561517 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms