RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ARF6P62330 175 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 OR10J3Q5JRS4 329 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 Q8N976 141 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 ASCL2Q99929 193 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 S4R3C0 116 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 TPRP12270 2363 aaKnown RBP7.98□□□□□ -1.13
LRRC28-216ENST00000559819 TRAV8-1A0A0A6YYK1 113 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 HIGD1CA8MV81 97 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 LY6LH3BQJ8 138 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 CCL21O00585 134 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 ZNF705AQ6ZN79 300 aaPredicted RBP7.98□□□□□ -1.13
LRRC28-216ENST00000559819 C8orf46Q8TAG6 207 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 TSKUQ8WUA8 353 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 RBM14Q96PK6 669 aaKnown RBP7.98□□□□□ -1.13
LRRC28-216ENST00000559819 WNT10AQ9GZT5 417 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 HIGD1AQ9Y241 93 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 ABCA1O95477 2261 aa7.98□□□□□ -1.13
LRRC28-216ENST00000559819 I3L2K1 104 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 CNIH1O95406 144 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 NTF3P20783 257 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 MMDQ15546 238 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 COX19Q49B96 90 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 EXOC3-AS1Q8N2X6 119 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 STXBP6Q8NFX7 210 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 OR8B3Q8NGG8 313 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 OR8B2Q96RD0 313 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 ARHGAP32A7KAX9 2087 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 ZZEF1O43149 2961 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 CA7P43166 264 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 KLF17Q5JT82 389 aaPredicted RBP7.97□□□□□ -1.13
LRRC28-216ENST00000559819 NIT1Q86X76 327 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 C18orf32Q8TCD1 76 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 ZNF586Q9NXT0 402 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 DCHS2Q6V1P9 2916 aa7.97□□□□□ -1.13
LRRC28-216ENST00000559819 LRBAP50851 2863 aa7.96□□□□□ -1.13
LRRC28-216ENST00000559819 DIRC3C9JPN6 131 aa7.96□□□□□ -1.13
LRRC28-216ENST00000559819 ZNF324O75467 553 aaPredicted RBP7.96□□□□□ -1.13
LRRC28-216ENST00000559819 TCRAP04437 139 aa7.96□□□□□ -1.13
LRRC28-216ENST00000559819 HIST1H1EP10412 219 aaKnown RBP7.96□□□□□ -1.13
LRRC28-216ENST00000559819 KIR3DL3Q8N743 410 aa7.96□□□□□ -1.13
LRRC28-216ENST00000559819 GPR82Q96P67 336 aa7.96□□□□□ -1.13
LRRC28-216ENST00000559819 MLST8Q9BVC4 326 aa7.96□□□□□ -1.13
LRRC28-216ENST00000559819 SLC25A39Q9BZJ4 359 aaPredicted RBP7.96□□□□□ -1.13
LRRC28-216ENST00000559819 KLF12Q9Y4X4 402 aa7.96□□□□□ -1.13
LRRC28-216ENST00000559819 CSMD1Q96PZ7 3565 aa7.96□□□□□ -1.13
LRRC28-216ENST00000559819 C5orf17Q8NAS9 161 aa7.96□□□□□ -1.14
LRRC28-216ENST00000559819 WIPF2Q8TF74 440 aaPredicted RBP7.96□□□□□ -1.14
LRRC28-216ENST00000559819 C17orf77Q96MU5 243 aa7.96□□□□□ -1.14
LRRC28-216ENST00000559819 RASL11BQ9BPW5 248 aa7.96□□□□□ -1.14
LRRC28-216ENST00000559819 VAMP8Q9BV40 100 aa7.96□□□□□ -1.14
LRRC28-216ENST00000559819 TACC2O95359 2948 aa7.96□□□□□ -1.14
LRRC28-216ENST00000559819 ABCA4P78363 2273 aa7.96□□□□□ -1.14
LRRC28-216ENST00000559819 K7EIM0 57 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 TOMM40O96008 361 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 IGKV1-17P01599 117 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 LIPFP07098 398 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 PLP1P60201 277 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 ADORA2A-AS1P86434 159 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 CIARTQ8N365 385 aaPredicted RBP7.95□□□□□ -1.14
LRRC28-216ENST00000559819 GTSF1Q8WW33 167 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 RPP21Q9H633 154 aaKnown RBP7.95□□□□□ -1.14
LRRC28-216ENST00000559819 M0R143 59 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 LTAP01374 205 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 GOLT1AQ6ZVE7 132 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 LY6G5BQ8NDX9 201 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 OR2D3Q8NGH3 330 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 PGLYRP4Q96LB8 373 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 RAXQ9Y2V3 346 aa7.95□□□□□ -1.14
LRRC28-216ENST00000559819 ANKHD1Q8IWZ3 2542 aaKnown RBP7.95□□□□□ -1.14
LRRC28-216ENST00000559819 A0A1B0GXF2 115 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 C3orf79P0CE67 100 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 HTR1DP28221 377 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 PAX2Q02962 417 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 LBHQ53QV2 105 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-216ENST00000559819 PRNTQ86SH4 94 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 BCL6BQ8N143 479 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-216ENST00000559819 FMC1Q96HJ9 113 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 C20orf144Q9BQM9 153 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 SPTA1P02549 2419 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 C19orf71A6NCJ1 209 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 M0QZ24 198 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 P01737 135 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 RAB4AP20338 218 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 NUTF2P61970 127 aaKnown RBP7.94□□□□□ -1.14
LRRC28-216ENST00000559819 HES1Q14469 280 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 Q86TA4 180 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 ATOH7Q8N100 152 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 CFHR4Q92496 578 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 ALKBH7Q9BT30 221 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-216ENST00000559819 CHRDL1Q9BU40 450 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 NBR2O15453 112 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 FBXL19-AS1Q494R0 122 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 LCN12Q6JVE5 192 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 RNASEKQ6P5S7 137 aaKnown RBP7.94□□□□□ -1.14
LRRC28-216ENST00000559819 RASL11AQ6T310 242 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 PRSS22Q9GZN4 317 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 OTORQ9NRC9 128 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 MRPL27Q9P0M9 148 aaKnown RBP7.94□□□□□ -1.14
LRRC28-216ENST00000559819 DPM3Q9P2X0 92 aa7.94□□□□□ -1.14
LRRC28-216ENST00000559819 IGF2RP11717 2491 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms