RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 TNCP24821 2201 aa-0.03□□□□□ -2.41
CASC4-210ENST00000559550 TNS3Q68CZ2 1445 aa-0.04□□□□□ -2.42
CASC4-210ENST00000559550 SCN10AQ9Y5Y9 1956 aa-0.04□□□□□ -2.42
CASC4-210ENST00000559550 SMIM9A6NGZ8 99 aa-0.04□□□□□ -2.42
CASC4-210ENST00000559550 C8GP07360 202 aa-0.04□□□□□ -2.42
CASC4-210ENST00000559550 AP3S2P59780 193 aa-0.04□□□□□ -2.42
CASC4-210ENST00000559550 PDZD9Q8IXQ8 264 aa-0.04□□□□□ -2.42
CASC4-210ENST00000559550 FAM172AQ8WUF8 416 aa-0.04□□□□□ -2.42
CASC4-210ENST00000559550 TP53RKQ96S44 253 aa-0.04□□□□□ -2.42
CASC4-210ENST00000559550 PCTPQ9UKL6 214 aa-0.04□□□□□ -2.42
CASC4-210ENST00000559550 CECR2Q9BXF3 1484 aa-0.04□□□□□ -2.42
CASC4-210ENST00000559550 IGLV3-32A0A0A0MS00 114 aa-0.05□□□□□ -2.42
CASC4-210ENST00000559550 TRAV10A0A0B4J240 114 aa-0.05□□□□□ -2.42
CASC4-210ENST00000559550 LYPLA2O95372 231 aa-0.05□□□□□ -2.42
CASC4-210ENST00000559550 EIF5AP63241 154 aaKnown RBP-0.05□□□□□ -2.42
CASC4-210ENST00000559550 C2orf82Q6UX34 121 aa-0.05□□□□□ -2.42
CASC4-210ENST00000559550 EXOC3-AS1Q8N2X6 119 aa-0.05□□□□□ -2.42
CASC4-210ENST00000559550 PSMF1Q92530 271 aa-0.05□□□□□ -2.42
CASC4-210ENST00000559550 FAM103A1Q9BTL3 118 aaKnown RBP-0.05□□□□□ -2.42
CASC4-210ENST00000559550 TMEM126AQ9H061 195 aa-0.05□□□□□ -2.42
CASC4-210ENST00000559550 PRELID3BQ9Y3B1 194 aa-0.05□□□□□ -2.42
CASC4-210ENST00000559550 ZFYVE26Q68DK2 2539 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 F8W1H4 67 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 SRP14P37108 136 aaKnown RBP-0.06□□□□□ -2.42
CASC4-210ENST00000559550 OMPP47874 163 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 RANP62826 216 aaKnown RBP-0.06□□□□□ -2.42
CASC4-210ENST00000559550 GLIPR1L1Q6UWM5 242 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 TRAPPC5Q8IUR0 188 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 OR10K1Q8NGX5 313 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 Q8TAT8 98 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 CCDC42Q96M95 316 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 PIEZO1Q92508 2521 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 FSIP2Q5CZC0 6907 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 PIK3C2GO75747 1445 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 SCN8AQ9UQD0 1980 aa-0.06□□□□□ -2.42
CASC4-210ENST00000559550 ARHGEF11O15085 1522 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 PLXNA4Q9HCM2 1894 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 H3BRM9 83 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 J3QRK9 145 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 PDE6DO43924 150 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 RPS17P08708 135 aaKnown RBP-0.07□□□□□ -2.42
CASC4-210ENST00000559550 FOXA3P55318 350 aaPredicted RBP-0.07□□□□□ -2.42
CASC4-210ENST00000559550 DSCR4P56555 118 aaPredicted RBP-0.07□□□□□ -2.42
CASC4-210ENST00000559550 C4orf22Q6V702 233 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 OR51A2Q8NGJ7 313 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 OR5D14Q8NGL3 314 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 TSKUQ8WUA8 353 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 ZC2HC1AQ96GY0 325 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 LINC00467Q9BRT7 94 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 GLTPQ9NZD2 209 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 MYH10P35580 1976 aa-0.07□□□□□ -2.42
CASC4-210ENST00000559550 KDM6AO15550 1401 aaPredicted RBP-0.07□□□□□ -2.42
CASC4-210ENST00000559550 CHD3Q12873 2000 aaKnown RBP-0.08□□□□□ -2.42
CASC4-210ENST00000559550 A8MWV9 139 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 E7EUB6 86 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 NDUFB3O43676 98 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 SERPINB9P50453 376 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 ZNF137PP52743 207 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 LSM6P62312 80 aaKnown RBP-0.08□□□□□ -2.42
CASC4-210ENST00000559550 AESQ08117 197 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 KRR1Q13601 381 aaKnown RBP-0.08□□□□□ -2.42
CASC4-210ENST00000559550 TEN1Q86WV5 123 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 LYSMD1Q96S90 227 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 SLC25A21Q9BQT8 299 aaPredicted RBP-0.08□□□□□ -2.42
CASC4-210ENST00000559550 TRIM4Q9C037 500 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 WFDC10AQ9H1F0 79 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 TMEM138Q9NPI0 162 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.08□□□□□ -2.42
CASC4-210ENST00000559550 ADCY9O60503 1353 aa-0.08□□□□□ -2.42
CASC4-210ENST00000559550 IGSF10Q6WRI0 2623 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 ZFYVE9O95405 1425 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 TRGV10A0A0A0MS01 117 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 NUPR2A6NF83 97 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 TCRBP04435 133 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 PIGPP57054 158 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 HIST1H3AP68431 136 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 H3F3AP84243 136 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 EDDM3AQ14507 147 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 C6orf52Q5T4I8 152 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 C1orf134Q5TEV5 83 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 LYRM7Q5U5X0 104 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 C22orf39Q6P5X5 142 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 GGACTQ9BVM4 153 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 LY96Q9Y6Y9 160 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 RTL1A6NKG5 1358 aa-0.09□□□□□ -2.42
CASC4-210ENST00000559550 NCOA1Q15788 1441 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 DMBT1Q9UGM3 2413 aaPredicted RBP-0.1□□□□□ -2.43
CASC4-210ENST00000559550 ERC2-IT1O76042 136 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 PPYP01298 95 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 COX7CP15954 63 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 SPINT3P49223 89 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 RRN3P1Q2M238 152 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 ATOH7Q8N100 152 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 NABP2Q9BQ15 211 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 MED29Q9NX70 200 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 LRP1Q07954 4544 aaKnown RBP-0.1□□□□□ -2.43
CASC4-210ENST00000559550 OBSL1O75147 1896 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 KNTC1P50748 2209 aa-0.1□□□□□ -2.43
CASC4-210ENST00000559550 CCDC144AA2RUR9 1427 aa-0.11□□□□□ -2.43
CASC4-210ENST00000559550 TRAV4A0A0B4J268 109 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms