RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 SIRPDQ9H106 197 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 TRAV1-1A0A0B4J248 108 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 RNF223E7ERA6 249 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 MGST1P10620 155 aaKnown RBP8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 BAGE3Q86Y29 109 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 BAGE2Q86Y30 109 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 NHLRC2Q8NBF2 726 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 IGHV3OR16-13A0A075B7E8 117 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 IGHV3-74A0A0B4J1X5 117 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 GRIFINA4D1Z8 144 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 DNLZQ5SXM8 178 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 RNASEH2CQ8TDP1 164 aaKnown RBP8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 C10orf105Q8TEF2 133 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 VAMP8Q9BV40 100 aa8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 F11RQ9Y624 299 aaKnown RBP8.6□□□□□ -1.03
CSPG4P5-201ENST00000558731 CENPVL3A0A0U1RRI6 287 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 OVOL3O00110 214 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 STAG3L2P0CL84 134 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 STAG3L3P0CL85 134 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 CRYBB3P26998 211 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 UBE2E1P51965 193 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 NDPQ00604 133 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 CACNG8Q8WXS5 425 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 TXN2Q99757 166 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 C1RLQ9NZP8 487 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 YTHDF2Q9Y5A9 579 aaKnown RBP8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 NOTCH3Q9UM47 2321 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 G3V318 75 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 LY6LH3BQJ8 138 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 KRTDAPP60985 99 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 SERTAD4Q9NUC0 356 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 PPP1R14DQ9NXH3 145 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 COTL1Q14019 142 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 ASPHD1Q5U4P2 390 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 CFHR4Q92496 578 aa8.59□□□□□ -1.03
CSPG4P5-201ENST00000558731 TCRBV4S1A1TA0A5B7 111 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 OR2T8A6NH00 312 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 M0QZK8 103 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 SMAD7O15105 426 aaKnown RBP8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 GGCTO75223 188 aaKnown RBP8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 C8orf88P0DMB2 117 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 PRR27Q6MZM9 219 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 CENPVQ7Z7K6 275 aaPredicted RBP8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 TMEM256Q8N2U0 113 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 CMTM2Q8TAZ6 248 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 BTF3L4Q96K17 158 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 DUX5Q96PT3 197 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 PAXXQ9BUH6 204 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 TEX22C9J3V5 150 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 PTTG1IPP53801 180 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 IGHV3-49A0A0A0MS15 119 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 ODF3BA8MYP8 253 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 SPINK4O60575 86 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 IL4P05112 153 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 MSMBP08118 114 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 PRR20EP86478 221 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 PRR20CP86479 221 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 PRR20DP86480 221 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 PRR20BP86481 221 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 PRR20AP86496 221 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 SELENOKQ9Y6D0 94 aa8.58□□□□□ -1.04
CSPG4P5-201ENST00000558731 MDFIC2A0A1B0GVS7 189 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 H3BUX3 64 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 HYPMO75409 117 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 PSG1P11464 419 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 MINOS1Q5TGZ0 78 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 HSPB9Q9BQS6 159 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 MINOS1-NBL1R4GNA1 71 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 C20orf202A1L168 122 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 F6UZH7 168 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 MRGPRG-AS1Q2M3A8 158 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 OR1L4Q8NGR5 311 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 POLR3KQ9Y2Y1 108 aaPredicted RBP8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 LINC01548A6NM66 108 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 FSTL3O95633 263 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 RPL23P62829 140 aaKnown RBP8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 SRSF1Q07955 248 aaKnown RBP eCLIP8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 TMEM183BQ1AE95 376 aa8.57□□□□□ -1.04
CSPG4P5-201ENST00000558731 CORTO00230 105 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 ATP6V0E1O15342 81 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 FCGR2BP31994 310 aaPredicted RBP8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 TMEM242Q9NWH2 141 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 FBXL7Q9UJT9 491 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 VPS13CQ709C8 3753 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 WNK1Q9H4A3 2382 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 ZNF207O43670 478 aaKnown RBP8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 SLC25A5P05141 298 aaKnown RBP8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 GPR183P32249 361 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 C1orf194Q5T5A4 169 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 TMEM167BQ9NRX6 74 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 CBY3A6NI87 242 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 ATP5IP56385 69 aaPredicted RBP8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 TPPP2P59282 170 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 SELENOTP62341 195 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 GNG5P63218 68 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 PQLC2Q6ZP29 291 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 LINC00479Q96M42 142 aa8.56□□□□□ -1.04
CSPG4P5-201ENST00000558731 IGHV1-69DA0A0B4J2H0 117 aa8.55□□□□□ -1.04
CSPG4P5-201ENST00000558731 IGHV1-69P01742 117 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms