RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 C4orf46Q504U0 113 aa11.3□□□□□ -0.6
CSHL1-208ENST00000558609 SPANXN5Q5MJ07 72 aa11.3□□□□□ -0.6
CSHL1-208ENST00000558609 OR4D5Q8NGN0 318 aa11.3□□□□□ -0.6
CSHL1-208ENST00000558609 NUDT15Q9NV35 164 aa11.3□□□□□ -0.6
CSHL1-208ENST00000558609 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
CSHL1-208ENST00000558609 NKX2-1P43699 371 aaPredicted RBP11.29□□□□□ -0.6
CSHL1-208ENST00000558609 OR2F1Q13607 317 aa11.29□□□□□ -0.6
CSHL1-208ENST00000558609 FBXL17Q9UF56 701 aa11.29□□□□□ -0.6
CSHL1-208ENST00000558609 HERC2O95714 4834 aa11.28□□□□□ -0.6
CSHL1-208ENST00000558609 H3BP45 60 aa11.28□□□□□ -0.6
CSHL1-208ENST00000558609 PFDN1O60925 122 aa11.28□□□□□ -0.6
CSHL1-208ENST00000558609 C4BPBP20851 252 aa11.28□□□□□ -0.6
CSHL1-208ENST00000558609 POLR2GP62487 172 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSHL1-208ENST00000558609 MITD1Q8WV92 249 aa11.28□□□□□ -0.6
CSHL1-208ENST00000558609 SMIM8Q96KF7 97 aa11.28□□□□□ -0.6
CSHL1-208ENST00000558609 MARVELD1Q9BSK0 173 aa11.28□□□□□ -0.6
CSHL1-208ENST00000558609 C20orf85Q9H1P6 137 aa11.28□□□□□ -0.6
CSHL1-208ENST00000558609 PSENENQ9NZ42 101 aa11.28□□□□□ -0.6
CSHL1-208ENST00000558609 KLK5Q9Y337 293 aaPredicted RBP11.28□□□□□ -0.6
CSHL1-208ENST00000558609 TMEM144Q7Z5S9 345 aa11.27□□□□□ -0.61
CSHL1-208ENST00000558609 CSNK1G2-AS1Q8NCQ2 148 aa11.27□□□□□ -0.61
CSHL1-208ENST00000558609 C11orf45Q8TAV5 145 aa11.27□□□□□ -0.61
CSHL1-208ENST00000558609 PHLDA1Q8WV24 401 aaPredicted RBP11.27□□□□□ -0.61
CSHL1-208ENST00000558609 GPN1Q9HCN4 374 aaPredicted RBP11.27□□□□□ -0.61
CSHL1-208ENST00000558609 SLC45A2Q9UMX9 530 aa11.27□□□□□ -0.61
CSHL1-208ENST00000558609 ALMS1Q8TCU4 4167 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 PMS2P5A8MQ11 134 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 ZNF705EA8MWA4 302 aaPredicted RBP11.26□□□□□ -0.61
CSHL1-208ENST00000558609 H3BMM0 161 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 ID1P41134 155 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 PAX9P55771 341 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 ACOT7LQ6ZUV0 252 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 OR8I2Q8N0Y5 310 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 Q8NAQ8 132 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 BPIFCQ8NFQ6 507 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 PPP1R14BQ96C90 147 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 MFFQ9GZY8 342 aa11.26□□□□□ -0.61
CSHL1-208ENST00000558609 SOCS3O14543 225 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 DEFB4AO15263 64 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 SSSCA1O60232 199 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 PRAF2O60831 178 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 HLA-DRB4P13762 266 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 MIFP14174 115 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 PSMB3P49720 205 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 BCAP31P51572 246 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 TAS2R30P59541 319 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 NANOS2P60321 138 aaKnown RBP11.25□□□□□ -0.61
CSHL1-208ENST00000558609 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
CSHL1-208ENST00000558609 AKR1C1Q04828 323 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 IAH1Q2TAA2 248 aaPredicted RBP11.25□□□□□ -0.61
CSHL1-208ENST00000558609 TMEM182Q6ZP80 229 aaPredicted RBP11.25□□□□□ -0.61
CSHL1-208ENST00000558609 ZBTB8BQ8NAP8 495 aaPredicted RBP11.25□□□□□ -0.61
CSHL1-208ENST00000558609 LINC00476Q8WZB0 136 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
CSHL1-208ENST00000558609 GATA2P23769 480 aaPredicted RBP11.24□□□□□ -0.61
CSHL1-208ENST00000558609 S100A7P31151 101 aa11.24□□□□□ -0.61
CSHL1-208ENST00000558609 SAMD13Q5VXD3 122 aa11.24□□□□□ -0.61
CSHL1-208ENST00000558609 TMEM14EPQ6UXP3 125 aa11.24□□□□□ -0.61
CSHL1-208ENST00000558609 C1QTNF4Q9BXJ3 329 aa11.24□□□□□ -0.61
CSHL1-208ENST00000558609 CLEC5AQ9NY25 188 aa11.24□□□□□ -0.61
CSHL1-208ENST00000558609 ALG5Q9Y673 324 aa11.24□□□□□ -0.61
CSHL1-208ENST00000558609 X6R8D5 127 aa11.24□□□□□ -0.61
CSHL1-208ENST00000558609 IGHV4-28A0A0C4DH34 117 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 ZNF98A6NK75 572 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 FNDC10F2Z333 226 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 ISLRO14498 428 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 SSNA1O43805 119 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 TSC22D2O75157 780 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 RBMY1A1P0DJD3 496 aaKnown RBP11.23□□□□□ -0.61
CSHL1-208ENST00000558609 RBMY1CP0DJD4 496 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 ORM2P19652 201 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 DLK1P80370 383 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 RBMY1FQ15415 496 aaKnown RBP11.23□□□□□ -0.61
CSHL1-208ENST00000558609 LINC00052Q96N35 136 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 CLUHP3Q96NS8 147 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 HRH4Q9H3N8 390 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 SAV1Q9H4B6 383 aaPredicted RBP11.23□□□□□ -0.61
CSHL1-208ENST00000558609 GSKIPQ9P0R6 139 aa11.23□□□□□ -0.61
CSHL1-208ENST00000558609 RCL1Q9Y2P8 373 aaKnown RBP11.23□□□□□ -0.61
CSHL1-208ENST00000558609 SMCO3A2RU48 225 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 CCNKO75909 580 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 SCGB1D2O95969 90 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
CSHL1-208ENST00000558609 IL5P05113 134 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 METTL15P1P0C7V9 234 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 GALR1P47211 349 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 MEOX2P50222 304 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 GDF5OSQ5U4N7 250 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 SPATA31B1PQ5VZV4 182 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 FOXI2Q6ZQN5 318 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 CYP2G1PQ6ZSU1 146 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 OR10P1Q8NGE3 313 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 OR1B1Q8NGR6 318 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 GPR82Q96P67 336 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 TMEM147Q9BVK8 224 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 MED28Q9H204 178 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 SLC25A32Q9H2D1 315 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 SLC25A22Q9H936 323 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 NPVFQ9HCQ7 196 aa11.22□□□□□ -0.61
CSHL1-208ENST00000558609 XCL2Q9UBD3 114 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms