RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 PYYP10082 97 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 ADMP35318 185 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 TPPP2P59282 170 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 CFHR3Q02985 330 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 KRTAP1-1Q07627 177 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 KIAA0141Q14154 515 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-233ENST00000557529 TMEM241Q24JQ0 296 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 ZNF674Q2M3X9 581 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 SIGLECL1Q8N7X8 197 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 TMEM190Q8WZ59 177 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 C11orf52Q96A22 123 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 FXYD5Q96DB9 178 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 CCDC140Q96MF4 163 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 NOL4LQ96MY1 436 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-233ENST00000557529 CHRDL1Q9BU40 450 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 PARLQ9H300 379 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 RPS10P5Q9NQ39 176 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 YAE1D1Q9NRH1 226 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 NAT8Q9UHE5 227 aa9.71□□□□□ -0.86
SHMT2-233ENST00000557529 C7orf77A4D0Y5 90 aa9.7□□□□□ -0.86
SHMT2-233ENST00000557529 B4DEV8 164 aa9.7□□□□□ -0.86
SHMT2-233ENST00000557529 BMPR1BO00238 502 aa9.7□□□□□ -0.86
SHMT2-233ENST00000557529 GP9P14770 177 aa9.7□□□□□ -0.86
SHMT2-233ENST00000557529 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-233ENST00000557529 SCGB2A2Q13296 93 aa9.7□□□□□ -0.86
SHMT2-233ENST00000557529 CLEC19AQ6UXS0 136 aa9.7□□□□□ -0.86
SHMT2-233ENST00000557529 Q6ZS46 218 aa9.7□□□□□ -0.86
SHMT2-233ENST00000557529 TCEAL7Q9BRU2 100 aa9.7□□□□□ -0.86
SHMT2-233ENST00000557529 DNASE2O00115 360 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-233ENST00000557529 NDUFB4O95168 129 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 NBEAP1P0C6P0 100 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 PF4V1P10720 104 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 USF2Q15853 346 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-233ENST00000557529 FAM209BQ5JX69 171 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 IL17RELQ6ZVW7 336 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 BPIFA4PQ86YQ2 179 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 C20orf24Q9BUV8 137 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 GNB4Q9HAV0 340 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 SDF2L1Q9HCN8 221 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 SMCO4Q9NRQ5 59 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 RABAC1Q9UI14 185 aa9.69□□□□□ -0.86
SHMT2-233ENST00000557529 FASNP49327 2511 aaKnown RBP9.68□□□□□ -0.86
SHMT2-233ENST00000557529 SCO2A0A1W2PP80 73 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 ZNF98A6NK75 572 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 GGTLC3B5MD39 225 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 HIST1H1EP10412 219 aaKnown RBP9.68□□□□□ -0.86
SHMT2-233ENST00000557529 NPPCP23582 126 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 RAB9AP51151 201 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 SLC35B1P78383 322 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 LEMD1Q68G75 181 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 ZNF343Q6P1L6 599 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 TOMM20LQ6UXN7 152 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 OR4F17Q8NGA8 305 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 TMEM160Q9NX00 188 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 ZANQ9Y493 2812 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 ITPR2Q14571 2701 aa9.68□□□□□ -0.86
SHMT2-233ENST00000557529 A0A087WWC5 75 aa9.67□□□□□ -0.86
SHMT2-233ENST00000557529 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.67□□□□□ -0.86
SHMT2-233ENST00000557529 IGHG4P01861 327 aa9.67□□□□□ -0.86
SHMT2-233ENST00000557529 ARL3P36405 182 aa9.67□□□□□ -0.86
SHMT2-233ENST00000557529 SUMO1P63165 101 aaKnown RBP9.67□□□□□ -0.86
SHMT2-233ENST00000557529 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-233ENST00000557529 ZFAND3Q9H8U3 227 aa9.67□□□□□ -0.86
SHMT2-233ENST00000557529 ZNF702PQ9H963 129 aa9.67□□□□□ -0.86
SHMT2-233ENST00000557529 PRELID1Q9Y255 219 aa9.67□□□□□ -0.86
SHMT2-233ENST00000557529 HECTD1Q9ULT8 2610 aa9.67□□□□□ -0.86
SHMT2-233ENST00000557529 TMEM95Q3KNT9 176 aa9.66□□□□□ -0.86
SHMT2-233ENST00000557529 TMEM88Q6PEY1 159 aa9.66□□□□□ -0.86
SHMT2-233ENST00000557529 ZNF329Q86UD4 541 aa9.66□□□□□ -0.86
SHMT2-233ENST00000557529 CBLN2Q8IUK8 224 aa9.66□□□□□ -0.86
SHMT2-233ENST00000557529 Q8N2B8 174 aa9.66□□□□□ -0.86
SHMT2-233ENST00000557529 BLNKQ8WV28 456 aa9.66□□□□□ -0.86
SHMT2-233ENST00000557529 KLK15Q9H2R5 256 aa9.66□□□□□ -0.86
SHMT2-233ENST00000557529 TUBA4BQ9H853 241 aa9.66□□□□□ -0.86
SHMT2-233ENST00000557529 FLNAP21333 2647 aaKnown RBP9.66□□□□□ -0.86
SHMT2-233ENST00000557529 TEX15Q9BXT5 2789 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 IGLC2P0DOY2 106 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 RPL7P18124 248 aaKnown RBP9.65□□□□□ -0.86
SHMT2-233ENST00000557529 CRYBB3P26998 211 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 PSMB8P28062 276 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 MYCNOSP40205 109 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 AKR1C3P42330 323 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 RANP62826 216 aaKnown RBP9.65□□□□□ -0.86
SHMT2-233ENST00000557529 RPL23P62829 140 aaKnown RBP9.65□□□□□ -0.86
SHMT2-233ENST00000557529 ADIRFQ15847 76 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 TEX38Q6PEX7 206 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 OR4X2Q8NGF9 303 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 HIST1H2BAQ96A08 127 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 ZNF414Q96IQ9 312 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 ELOVL1Q9BW60 279 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 CTDSP1Q9GZU7 261 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 LY96Q9Y6Y9 160 aa9.65□□□□□ -0.86
SHMT2-233ENST00000557529 VPS13CQ709C8 3753 aa9.65□□□□□ -0.87
SHMT2-233ENST00000557529 CSMD2Q7Z408 3487 aa9.65□□□□□ -0.87
SHMT2-233ENST00000557529 IGHV3-35A0A0C4DH35 117 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 CXorf65A6NEN9 183 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 HELTA6NFD8 242 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 C9JCJ5 164 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 NDUFA4O00483 81 aa9.64□□□□□ -0.87
SHMT2-233ENST00000557529 MRPS12O15235 138 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms