RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 ZNF331Q9NQX6 463 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-246ENST00000557030 SLC35D1Q9NTN3 355 aa3.74□□□□□ -1.81
ATXN3-246ENST00000557030 BET1LQ9NYM9 111 aa3.74□□□□□ -1.81
ATXN3-246ENST00000557030 PSG11Q9UQ72 335 aa3.74□□□□□ -1.81
ATXN3-246ENST00000557030 FOXA2Q9Y261 457 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-246ENST00000557030 LAMTOR2Q9Y2Q5 125 aa3.74□□□□□ -1.81
ATXN3-246ENST00000557030 MRPS16Q9Y3D3 137 aaKnown RBP3.74□□□□□ -1.81
ATXN3-246ENST00000557030 TBL2Q9Y4P3 447 aaKnown RBP3.74□□□□□ -1.81
ATXN3-246ENST00000557030 YTHDF2Q9Y5A9 579 aaKnown RBP3.74□□□□□ -1.81
ATXN3-246ENST00000557030 V9GYV3 84 aa3.74□□□□□ -1.81
ATXN3-246ENST00000557030 DOCK10Q96BY6 2186 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 DSPP15924 2871 aaKnown RBP3.73□□□□□ -1.81
ATXN3-246ENST00000557030 CEP295Q9C0D2 2601 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 A0A1W2PRE2 83 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 SMIM27A0A1W2PRY6 76 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 IZUMO1RA6ND01 250 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 DPRXA6NFQ7 191 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 C15orf61A6NNL5 157 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 KLRC4-KLRK1H3BQV0 150 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 SLC17A3O00476 420 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 APCSP02743 223 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 LINC00869P0C866 280 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 MAGEA5P43359 124 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 RPS20P60866 119 aaKnown RBP3.73□□□□□ -1.81
ATXN3-246ENST00000557030 HSPE1P61604 102 aaKnown RBP3.73□□□□□ -1.81
ATXN3-246ENST00000557030 PSG7Q13046 419 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 KLF5Q13887 457 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-246ENST00000557030 C3AR1Q16581 482 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 POU2AF1Q16633 256 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 CENPWQ5EE01 88 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 GCSAMLQ5JQS6 135 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 LEMD1Q68G75 181 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 Q6ZN92 141 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 TMEM136Q6ZRR5 245 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 FAM231DQ6ZW35 169 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 ZNF738Q8NE65 137 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 OR4P4Q8NGL7 312 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 SLC25A40Q8TBP6 338 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 TMEM190Q8WZ59 177 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 SGK494Q96LW2 274 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 OR2V2Q96R30 315 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 FAM103A1Q9BTL3 118 aaKnown RBP3.73□□□□□ -1.81
ATXN3-246ENST00000557030 MRPL32Q9BYC8 188 aaKnown RBP3.73□□□□□ -1.81
ATXN3-246ENST00000557030 PLEKHA3Q9HB20 300 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 DNAJC4Q9NNZ3 241 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 GNG12Q9UBI6 72 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 PRNDQ9UKY0 176 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 IGF2RP11717 2491 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 ITPR1Q14643 2758 aa3.73□□□□□ -1.81
ATXN3-246ENST00000557030 RTTNQ86VV8 2226 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 FBN3Q75N90 2809 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 CNOT1A5YKK6 2376 aaKnown RBP3.72□□□□□ -1.81
ATXN3-246ENST00000557030 TRAV9-2A0A087WT02 112 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 IGHV2-26A0A0B4J1V2 119 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 IGHV1-69-2A0A0G2JMI3 117 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 C15orf65H3BRN8 121 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 K7EP13 123 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 M0R1X1 148 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 TCF21O43680 179 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 TIMM8AO60220 97 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-246ENST00000557030 HYPMO75409 117 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 OR2J3O76001 311 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 CA2P00918 260 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 C3orf79P0CE67 100 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 C8orf88P0DMB2 117 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 PMCHP20382 165 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 HNF1AP20823 631 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 USF1P22415 310 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-246ENST00000557030 SRIP30626 198 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 PPOXP50336 477 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 AESQ08117 197 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 PSG5Q15238 335 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 KIAA1644Q3SXP7 199 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 MORN2Q502X0 79 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 C14orf177Q52M58 125 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 SPINK9Q5DT21 86 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 SAPCD1Q5SSQ6 148 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 IBA57Q5T440 356 aaKnown RBP3.72□□□□□ -1.81
ATXN3-246ENST00000557030 ATP1A1-AS1Q5TC04 95 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 HES3Q5TGS1 186 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 WDR82Q6UXN9 313 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 ATP5L2Q7Z4Y8 100 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 KRTAP7-1Q8IUC3 87 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 Q8N976 141 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 ZNF439Q8NDP4 499 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 ST6GALNAC3Q8NDV1 305 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 OR1L4Q8NGR5 311 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 KLF14Q8TD94 323 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-246ENST00000557030 SMIM12Q96EX1 92 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 NABP2Q9BQ15 211 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 TMEM14BQ9NUH8 114 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 SPRR3Q9UBC9 169 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 ZNF257Q9Y2Q1 563 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 SOX21Q9Y651 276 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-246ENST00000557030 CELSR3Q9NYQ7 3312 aa3.72□□□□□ -1.81
ATXN3-246ENST00000557030 FREM2Q5SZK8 3169 aa3.71□□□□□ -1.81
ATXN3-246ENST00000557030 MYO18BQ8IUG5 2567 aa3.71□□□□□ -1.81
ATXN3-246ENST00000557030 IGHV3-43A0A0B4J1X8 118 aa3.71□□□□□ -1.82
ATXN3-246ENST00000557030 NKX6-3A6NJ46 265 aa3.71□□□□□ -1.82
ATXN3-246ENST00000557030 OR7C2O60412 319 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms