RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 PACRGQ96M98 296 aaPredicted RBP7.95□□□□□ -1.14
TMEM260-211ENST00000556648 C17orf77Q96MU5 243 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 C7orf69Q9H7B7 122 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 SERTAD4Q9NUC0 356 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 TBL2Q9Y4P3 447 aaKnown RBP7.95□□□□□ -1.14
TMEM260-211ENST00000556648 ABCA1O95477 2261 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 WNK2Q9Y3S1 2297 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 GRIFINA4D1Z8 144 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 ZNF705GA8MUZ8 300 aaPredicted RBP7.95□□□□□ -1.14
TMEM260-211ENST00000556648 NPFFO15130 113 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 TOMM40O96008 361 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 IL4P05112 153 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 PDLIM4P50479 330 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 YPEL3P61236 119 aaPredicted RBP7.95□□□□□ -1.14
TMEM260-211ENST00000556648 USF2Q15853 346 aaPredicted RBP7.95□□□□□ -1.14
TMEM260-211ENST00000556648 TMEM183BQ1AE95 376 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 PRR27Q6MZM9 219 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 ZNF491Q8N8L2 437 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 BTF3L4Q96K17 158 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 CCL19Q99731 98 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 MRPL18Q9H0U6 180 aaKnown RBP7.95□□□□□ -1.14
TMEM260-211ENST00000556648 GSN-AS1Q9NRJ2 163 aa7.95□□□□□ -1.14
TMEM260-211ENST00000556648 LINC01548A6NM66 108 aa7.94□□□□□ -1.14
TMEM260-211ENST00000556648 GNG7O60262 68 aa7.94□□□□□ -1.14
TMEM260-211ENST00000556648 NUPR1O60356 82 aa7.94□□□□□ -1.14
TMEM260-211ENST00000556648 FABP1P07148 127 aa7.94□□□□□ -1.14
TMEM260-211ENST00000556648 Q56UQ5 140 aa7.94□□□□□ -1.14
TMEM260-211ENST00000556648 LINC00322Q6ZN03 302 aaPredicted RBP7.94□□□□□ -1.14
TMEM260-211ENST00000556648 TMEM256Q8N2U0 113 aa7.94□□□□□ -1.14
TMEM260-211ENST00000556648 RNF125Q96EQ8 232 aa7.94□□□□□ -1.14
TMEM260-211ENST00000556648 ASCL2Q99929 193 aa7.94□□□□□ -1.14
TMEM260-211ENST00000556648 SHANK2-AS3Q9BTD1 123 aa7.94□□□□□ -1.14
TMEM260-211ENST00000556648 TMEM14CQ9P0S9 112 aa7.94□□□□□ -1.14
TMEM260-211ENST00000556648 ASH1LQ9NR48 2969 aaKnown RBP7.94□□□□□ -1.14
TMEM260-211ENST00000556648 TRAV9-1A0A075B6T8 112 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 TRAV8-1A0A0A6YYK1 113 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 CENPVL3A0A0U1RRI6 287 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 WI2-2373I1.2A0A1W2PRP0 233 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 SMIM27A0A1W2PRY6 76 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 LINC00587B1AMM8 73 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 FAM106CPP0CH98 169 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 MRPL54Q6P161 138 aaKnown RBP7.93□□□□□ -1.14
TMEM260-211ENST00000556648 NRGNQ92686 78 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 MBD6Q96DN6 1003 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 TP53TG3Q9ULZ0 132 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 SOX21Q9Y651 276 aaPredicted RBP7.93□□□□□ -1.14
TMEM260-211ENST00000556648 OR2T8A6NH00 312 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 SNURFLB1AK76 121 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 F2Z2F3 143 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 ATP6V0E1O15342 81 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 TCRAP04437 139 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 MFAP4P55083 255 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 UBE2G1P62253 170 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 ECSCRQ19T08 205 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 TMEM219Q86XT9 240 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 C5orf17Q8NAS9 161 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 NUDT10Q8NFP7 164 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 NUDT11Q96G61 164 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 ZNF414Q96IQ9 312 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 ATG101Q9BSB4 218 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 C21orf62Q9NYP8 219 aa7.93□□□□□ -1.14
TMEM260-211ENST00000556648 IGHV3OR16-8A0A075B7F1 116 aa7.92□□□□□ -1.14
TMEM260-211ENST00000556648 MRPS12O15235 138 aaKnown RBP7.92□□□□□ -1.14
TMEM260-211ENST00000556648 GATCO43716 136 aaKnown RBP7.92□□□□□ -1.14
TMEM260-211ENST00000556648 HLA-DRB1P01911 266 aa7.92□□□□□ -1.14
TMEM260-211ENST00000556648 IGLC2P0DOY2 106 aa7.92□□□□□ -1.14
TMEM260-211ENST00000556648 HIST1H1EP10412 219 aaKnown RBP7.92□□□□□ -1.14
TMEM260-211ENST00000556648 FCGR2BP31994 310 aaPredicted RBP7.92□□□□□ -1.14
TMEM260-211ENST00000556648 LINC00310P59036 64 aa7.92□□□□□ -1.14
TMEM260-211ENST00000556648 PRR31Q5SQ13 230 aa7.92□□□□□ -1.14
TMEM260-211ENST00000556648 TMEM136Q6ZRR5 245 aa7.92□□□□□ -1.14
TMEM260-211ENST00000556648 C10orf105Q8TEF2 133 aa7.92□□□□□ -1.14
TMEM260-211ENST00000556648 FBXL7Q9UJT9 491 aa7.92□□□□□ -1.14
TMEM260-211ENST00000556648 KLF12Q9Y4X4 402 aa7.92□□□□□ -1.14
TMEM260-211ENST00000556648 TRBV19A0A075B6N1 114 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 IGHV4-30-2A0A087WSY4 118 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 G3V318 75 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 PAX8Q06710 450 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 KIAA1644Q3SXP7 199 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 BRD3OSQ6XYD6 125 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 GOLT1AQ6ZVE7 132 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 FAM231DQ6ZW35 169 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 Q86TA4 180 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 GBGT1Q8N5D6 347 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 TMEM68Q96MH6 324 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 PIMREGQ9BSJ6 248 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 CHRDL1Q9BU40 450 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 OTORQ9NRC9 128 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 CFAP46Q8IYW2 2715 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 TRAV40A0A0B4J280 105 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 IGHV3-35A0A0C4DH35 117 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 VWC2LB2RUY7 222 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 LTAP01374 205 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 IGLV2-11P01706 119 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 BRS3P32247 399 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 S100A12P80511 92 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 GDF5OSQ5U4N7 250 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 UNQ5815/PRO19632Q6UWF5 114 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 GRAMD2BQ96HH9 432 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 ZNF48Q96MX3 618 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms