RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 RPL30P62888 115 aaKnown RBP4.9□□□□□ -1.63
TDP1-215ENST00000556498 SRSF9Q13242 221 aaKnown RBP eCLIP4.9□□□□□ -1.63
TDP1-215ENST00000556498 ZNF542PQ5EBM4 170 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 SCGB1D4Q6XE38 83 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 LINC00305Q7Z4B0 112 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 TMEM190Q8WZ59 177 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 C2orf48Q96LS8 159 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 IGF2BP2-AS1Q96M15 143 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 C18orf15Q96N68 181 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 GPX7Q96SL4 187 aaPredicted RBP4.9□□□□□ -1.63
TDP1-215ENST00000556498 PRSS27Q9BQR3 290 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 SLC25A2Q9BXI2 301 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 CKLFQ9UBR5 152 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 AMMECR1Q9Y4X0 333 aaPredicted RBP4.9□□□□□ -1.63
TDP1-215ENST00000556498 OARD1Q9Y530 152 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 HILPDAQ9Y5L2 63 aa4.9□□□□□ -1.63
TDP1-215ENST00000556498 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 C2CD4DB7Z1M9 353 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 IL4P05112 153 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 ASAH2BP0C7U1 165 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 DUTP33316 252 aaKnown RBP4.89□□□□□ -1.63
TDP1-215ENST00000556498 ATP5EP56381 51 aaPredicted RBP4.89□□□□□ -1.63
TDP1-215ENST00000556498 DAD1P61803 113 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 LY6G5CQ5SRR4 150 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 TMEM170BQ5T4T1 132 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 KCTD18Q6PI47 426 aaPredicted RBP4.89□□□□□ -1.63
TDP1-215ENST00000556498 ZNF493Q6ZR52 646 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 LINC01561Q8N1V8 128 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 LRRC29Q8WV35 223 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 IL1F10Q8WWZ1 152 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 DPH3P1Q9H4G8 78 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 ZNF665Q9H7R5 613 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 Q9H8V8 135 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 IL36RNQ9UBH0 155 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 WDR83OSQ9Y284 106 aa4.89□□□□□ -1.63
TDP1-215ENST00000556498 TNRC6CQ9HCJ0 1690 aaKnown RBP4.89□□□□□ -1.63
TDP1-215ENST00000556498 TRAV17A0A0B4J275 112 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 IGHV1-58A0A0C4DH39 117 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 PLAC8L1A1L4L8 177 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 ADM5C9JUS6 153 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 SMKR1H3BMG3 65 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 K7EM74 188 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 LGALS9O00182 355 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 BMPR1BO00238 502 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 TIMM23O14925 209 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 SLC25A14O95258 325 aaPredicted RBP4.88□□□□□ -1.63
TDP1-215ENST00000556498 SSR2P43308 183 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 SUB1P53999 127 aaKnown RBP eCLIP4.88□□□□□ -1.63
TDP1-215ENST00000556498 MLF2Q15773 248 aaPredicted RBP4.88□□□□□ -1.63
TDP1-215ENST00000556498 C1orf140Q5VVS0 124 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 HIST2H2BCQ6DN03 193 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 HIST2H2BDQ6DRA6 164 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 PRR26Q8N8Z3 221 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 DCAF4L2Q8NA75 395 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 THAP8Q8NA92 274 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 TMEM158Q8WZ71 300 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 TSACCQ96A04 125 aaPredicted RBP4.88□□□□□ -1.63
TDP1-215ENST00000556498 ODF3Q96PU9 254 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 TIMM9Q9Y5J7 89 aa4.88□□□□□ -1.63
TDP1-215ENST00000556498 TRAV8-1A0A0A6YYK1 113 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 J3QLW9 94 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 K7EMT4 169 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 NDUFB3O43676 98 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 SYNGR2O43760 224 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 NDUFS5O43920 106 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 SCRG1O75711 98 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 TCL1BO95988 128 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 NPYP01303 97 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 CXCL8P10145 99 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 COX5AP20674 150 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 RPL38P63173 70 aaKnown RBP4.87□□□□□ -1.63
TDP1-215ENST00000556498 ADIGQ0VDE8 80 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 LGALS9CQ6DKI2 356 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 Q6ZQT7 251 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 LINC00643Q86TS7 51 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 PDPNQ86YL7 162 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 KRTAP1-3Q8IUG1 177 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 ZCCHC24Q8N2G6 241 aaKnown RBP4.87□□□□□ -1.63
TDP1-215ENST00000556498 FAM19A2Q8N3H0 131 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 SERP2Q8N6R1 65 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 NEXN-AS1Q8NBZ9 246 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 C11orf45Q8TAV5 145 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 KLK6Q92876 244 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 TRGV9Q99603 122 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 DCTN5Q9BTE1 182 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 CHAC1Q9BUX1 264 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 ZNF747Q9BV97 191 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 DEFB127Q9H1M4 99 aa4.87□□□□□ -1.63
TDP1-215ENST00000556498 F11RQ9Y624 299 aaKnown RBP4.87□□□□□ -1.63
TDP1-215ENST00000556498 COL4A1P02462 1669 aa4.86□□□□□ -1.63
TDP1-215ENST00000556498 UBE2L5PA0A1B0GUS4 154 aa4.86□□□□□ -1.63
TDP1-215ENST00000556498 TCRBV4S1A1TA0A5B7 111 aa4.86□□□□□ -1.63
TDP1-215ENST00000556498 F2Z2F3 143 aa4.86□□□□□ -1.63
TDP1-215ENST00000556498 PRRG2O14669 202 aa4.86□□□□□ -1.63
TDP1-215ENST00000556498 DSCR4P56555 118 aaPredicted RBP4.86□□□□□ -1.63
TDP1-215ENST00000556498 FXYD6P3P58550 94 aa4.86□□□□□ -1.63
TDP1-215ENST00000556498 KRTAP10-2P60368 255 aa4.86□□□□□ -1.63
TDP1-215ENST00000556498 ERVK-16P61578 105 aa4.86□□□□□ -1.63
TDP1-215ENST00000556498 TMEM207Q6UWW9 146 aa4.86□□□□□ -1.63
TDP1-215ENST00000556498 RAB42Q8N4Z0 105 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms