RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 C1QTNF4Q9BXJ3 329 aa4.79□□□□□ -1.64
ATXN3-236ENST00000556220 QTRT1Q9BXR0 403 aaKnown RBP4.79□□□□□ -1.64
ATXN3-236ENST00000556220 C11orf1Q9H5F2 150 aa4.79□□□□□ -1.64
ATXN3-236ENST00000556220 MCUBQ9NWR8 336 aa4.79□□□□□ -1.64
ATXN3-236ENST00000556220 XCL2Q9UBD3 114 aa4.79□□□□□ -1.64
ATXN3-236ENST00000556220 RABAC1Q9UI14 185 aa4.79□□□□□ -1.64
ATXN3-236ENST00000556220 TRAV3A0A0B4J244 114 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 IGHV3-66A0A0C4DH42 116 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 SMIM9A6NGZ8 99 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 H0YIZ8 118 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 K7EQG2 157 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 UPK2O00526 184 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 SMR3BP02814 79 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-236ENST00000556220 HNRNPCP07910 306 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATXN3-236ENST00000556220 ZNF688P0C7X2 276 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 TRAPPC2P0DI81 140 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 TRAPPC2BP0DI82 140 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 GNRHRP30968 328 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 NUTF2P61970 127 aaKnown RBP4.78□□□□□ -1.64
ATXN3-236ENST00000556220 RRAS2P62070 204 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-236ENST00000556220 WT1-ASQ06250 92 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 DHRS2Q13268 280 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 IZUMO4Q1ZYL8 232 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 FAM222AQ5U5X8 452 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 THOC7Q6I9Y2 204 aaKnown RBP4.78□□□□□ -1.64
ATXN3-236ENST00000556220 ZNF705AQ6ZN79 300 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-236ENST00000556220 HSD17B13Q7Z5P4 300 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-236ENST00000556220 MOB3AQ96BX8 217 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 C17orf77Q96MU5 243 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 RAB40CQ96S21 281 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 TP53RKQ96S44 253 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 C7orf50Q9BRJ6 194 aaKnown RBP4.78□□□□□ -1.64
ATXN3-236ENST00000556220 GINS3Q9BRX5 216 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 COMMD5Q9GZQ3 224 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 HEYLQ9NQ87 328 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-236ENST00000556220 CCL28Q9NRJ3 127 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 EHFQ9NZC4 300 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 OR2W1Q9Y3N9 320 aa4.78□□□□□ -1.64
ATXN3-236ENST00000556220 F11RQ9Y624 299 aaKnown RBP4.78□□□□□ -1.64
ATXN3-236ENST00000556220 C9orf170A2RU37 121 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 ZNF705FA8MVS1 300 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-236ENST00000556220 ADAP1O75689 374 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 PPYP01298 95 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 FGF2P09038 288 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 P0C879 139 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 ZNF705DP0CH99 300 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-236ENST00000556220 ZNF705BP0CI00 300 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-236ENST00000556220 FCGR2CP31995 323 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 MFAP4P55083 255 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 CCL18P55774 89 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 SP6Q3SY56 376 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 SCGB2B2Q4G0G5 96 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 RNASE10Q5GAN6 216 aaKnown RBP4.77□□□□□ -1.65
ATXN3-236ENST00000556220 TOMM20LQ6UXN7 152 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 ZNF818PQ6ZRF7 136 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 TERB2Q8NHR7 220 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 ENKURQ8TC29 256 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 RPL36ALQ969Q0 106 aaKnown RBP4.77□□□□□ -1.65
ATXN3-236ENST00000556220 TXN2Q99757 166 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 ZNF2Q9BSG1 426 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-236ENST00000556220 KRTAP1-5Q9BYS1 174 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 TMEM231Q9H6L2 316 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 Q9H8V8 135 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 SEPSECSQ9HD40 501 aaKnown RBP4.77□□□□□ -1.65
ATXN3-236ENST00000556220 RABL2AQ9UBK7 228 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-236ENST00000556220 MGAT4CQ9UBM8 478 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 RABL2BQ9UNT1 228 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 LINC00588Q9Y4M8 146 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 PUS1Q9Y606 427 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATXN3-236ENST00000556220 RFNGQ9Y644 331 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 LRP2P98164 4655 aa4.77□□□□□ -1.65
ATXN3-236ENST00000556220 TEX50A0A1B0GTY4 177 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 NAP1L6A6NFF2 107 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 CRYM-AS1A6NIL9 109 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 NXPH3O95157 252 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 OR4E1P0C645 316 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 TAS2R31P59538 309 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 DEFA1P59665 94 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 DEFA3P59666 94 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 DLK1P80370 383 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 POU2AF1Q16633 256 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 PHLDA2Q53GA4 152 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 MORN5Q5VZ52 161 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 GSG1LQ6UXU4 331 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 STXBP6Q8NFX7 210 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 OR1L8Q8NGR8 309 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 OR5H2Q8NGV7 314 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 ZNF431Q8TF32 576 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-236ENST00000556220 DCANP1Q8TF63 244 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 GLYATL2Q8WU03 294 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 RRNAD1Q96FB5 475 aaKnown RBP4.76□□□□□ -1.65
ATXN3-236ENST00000556220 IFT46Q9NQC8 304 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 NDUFA4L2Q9NRX3 87 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 TAS2R8Q9NYW2 309 aa4.76□□□□□ -1.65
ATXN3-236ENST00000556220 RPS10-NUDT3A0A1W2PQS6 291 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 A0A1W2PS18 150 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 H3BMM0 161 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 I3L2K1 104 aa4.75□□□□□ -1.65
ATXN3-236ENST00000556220 RBFOX2O43251 390 aaKnown RBP eCLIP4.75□□□□□ -1.65
ATXN3-236ENST00000556220 SCGNO76038 276 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms