RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ICAM4Q14773 271 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 FXYD3Q14802 87 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 GUCA2BQ16661 112 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 C5orf64Q2M2E5 130 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 PVRIGQ6DKI7 326 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 ZNF562Q6V9R5 426 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 IQCF2Q8IXL9 164 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 Q8N6K4 173 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 OR2T6Q8NHC8 308 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 RNF2Q99496 336 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 RARRES2Q99969 163 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 RASL11BQ9BPW5 248 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 F11RQ9Y624 299 aaKnown RBP5.38□□□□□ -1.55
SLIRP-204ENST00000555890 PLXNB1O43157 2135 aa5.38□□□□□ -1.55
SLIRP-204ENST00000555890 IGHV1-69DA0A0B4J2H0 117 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 TCRBV4S1A1TA0A5B7 111 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 FCN1O00602 326 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 HMGB3O15347 200 aaKnown RBP5.37□□□□□ -1.55
SLIRP-204ENST00000555890 IGHV1-69P01742 117 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 FABP1P07148 127 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 CRYGCP07315 174 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 MSMBP08118 114 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 LINC00869P0C866 280 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 STAG3L2P0CL84 134 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 STAG3L3P0CL85 134 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 IGHV4-31P0DP07 118 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 DEFA4P12838 97 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 AREGP15514 252 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 CD24P25063 80 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 TAS2R45P59539 299 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 SUMO2P61956 95 aaKnown RBP5.37□□□□□ -1.55
SLIRP-204ENST00000555890 CYP2G1PQ6ZSU1 146 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 SSX7Q7RTT5 188 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 DYNAPQ8N1N2 210 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 THAP8Q8NA92 274 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 OR1L4Q8NGR5 311 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 SUN5Q8TC36 379 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 TXNDC17Q9BRA2 123 aa5.37□□□□□ -1.55
SLIRP-204ENST00000555890 TECRQ9NZ01 308 aaKnown RBP5.37□□□□□ -1.55
SLIRP-204ENST00000555890 DNAH9Q9NYC9 4486 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 GAGE12BA1L429 117 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 GAGE12HA6NDE8 117 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 NPIPB5A8MRT5 1133 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 M0R036 132 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 UBE2CO00762 179 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 FBP1P09467 338 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 HNF1AP20823 631 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 RND2P52198 227 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 CEBPGP53567 150 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 BPIFB3P59826 476 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 CX3CL1P78423 397 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 MEF2BQ02080 365 aaPredicted RBP5.36□□□□□ -1.55
SLIRP-204ENST00000555890 LOXL1Q08397 574 aaPredicted RBP5.36□□□□□ -1.55
SLIRP-204ENST00000555890 FAM74A3Q4VXF1 159 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 GCSAMLQ5JQS6 135 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 FAM120AOSQ5T036 256 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 RUSC1-AS1Q66K80 236 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 ATRAIDQ6UW56 229 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.36□□□□□ -1.55
SLIRP-204ENST00000555890 TMEM116Q8NCL8 245 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 C17orf50Q8WW18 174 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 ARPC1AQ92747 370 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 PFDN5Q99471 154 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 TRGV9Q99603 122 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 NIPSNAP3BQ9BS92 247 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 SLC25A33Q9BSK2 321 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 ELOVL1Q9BW60 279 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 MRPL32Q9BYC8 188 aaKnown RBP5.36□□□□□ -1.55
SLIRP-204ENST00000555890 TMPRSS5Q9H3S3 457 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 FNDC4Q9H6D8 234 aaPredicted RBP5.36□□□□□ -1.55
SLIRP-204ENST00000555890 DNAJC4Q9NNZ3 241 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 TNFRSF19Q9NS68 423 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 THYN1Q9P016 225 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 FUT9Q9Y231 359 aa5.36□□□□□ -1.55
SLIRP-204ENST00000555890 IGKV1OR2-108A0A075B7D4 117 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 F6UZH7 168 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 TMEM250H0YL14 139 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 H3BQ15 152 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 J3QLI3 93 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 PDE6DO43924 150 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 COX7A2P2O60397 106 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 PAGE4O60829 102 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 CLN5O75503 358 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 SCGB2A1O75556 95 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 ARL14EPLP0DKL9 152 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 APELAP0DMC3 54 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 HIST1H1BP16401 226 aaKnown RBP5.35□□□□□ -1.55
SLIRP-204ENST00000555890 CTRB1P17538 263 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 PAX6P26367 422 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 NPBWR1P48145 328 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 MFAP2P55001 183 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 RHEBQ15382 184 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 CASC10Q5T4H9 136 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 FAM78BQ5VT40 261 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 C10orf113Q5VZT2 155 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 CTRB2Q6GPI1 263 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 PQLC2Q6ZP29 291 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 TTC9CQ8N5M4 171 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 CYB561D1Q8N8Q1 229 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 OR4F5Q8NH21 305 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms