RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 FAM209BQ5JX69 171 aa7.46□□□□□ -1.22
HNRNPC-220ENST00000555585 S100A7AQ86SG5 101 aa7.46□□□□□ -1.22
HNRNPC-220ENST00000555585 OR4F5Q8NH21 305 aa7.46□□□□□ -1.22
HNRNPC-220ENST00000555585 LINC01006Q8NI28 216 aa7.46□□□□□ -1.22
HNRNPC-220ENST00000555585 UHRF2Q96PU4 802 aa7.46□□□□□ -1.22
HNRNPC-220ENST00000555585 TMPRSS5Q9H3S3 457 aa7.46□□□□□ -1.22
HNRNPC-220ENST00000555585 GNG13Q9P2W3 67 aa7.46□□□□□ -1.22
HNRNPC-220ENST00000555585 PEF1Q9UBV8 284 aaKnown RBP7.46□□□□□ -1.22
HNRNPC-220ENST00000555585 RABAC1Q9UI14 185 aa7.46□□□□□ -1.22
HNRNPC-220ENST00000555585 HIVEP1P15822 2718 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 IGHV3OR16-8A0A075B7F1 116 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 RAB19A4D1S5 217 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 BMPR1BO00238 502 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 GGCTO75223 188 aaKnown RBP7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 IFNA1P01562 189 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 LGALS1P09382 135 aaKnown RBP7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 USF2Q15853 346 aaPredicted RBP7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 GUK1Q16774 197 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 HAGHQ16775 308 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 TOR2AQ5JU69 321 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 MORN5Q5VZ52 161 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 TOMM20LQ6UXN7 152 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 RNF152Q8N8N0 203 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 UBE2E2Q96LR5 201 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 C20orf24Q9BUV8 137 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 SLC25A39Q9BZJ4 359 aaPredicted RBP7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 EIF5A2Q9GZV4 153 aaKnown RBP7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 TREM1Q9NP99 234 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 MRPL27Q9P0M9 148 aaKnown RBP7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 RNF114Q9Y508 228 aa7.45□□□□□ -1.22
HNRNPC-220ENST00000555585 LOC100996750A0A140TA64 210 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 CLPSL1A2RUU4 121 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 RBFOX3A6NFN3 312 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 ATP6V1G1O75348 118 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 GCHFRP30047 84 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 S100A7P31151 101 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 PSMB3P49720 205 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 PPT1P50897 306 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 LEMD1Q68G75 181 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 PQLC2Q6ZP29 291 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 MYOZ3Q8TDC0 251 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 FAM210AQ96ND0 272 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 SCRT1Q9BWW7 348 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 SLC25A2Q9BXI2 301 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 KRTAP4-6Q9BYQ5 205 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 TMEM231Q9H6L2 316 aa7.44□□□□□ -1.22
HNRNPC-220ENST00000555585 ZNF320A2RRD8 509 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 H3BRN7 92 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 NDUFA4O00483 81 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 ZNF207O43670 478 aaKnown RBP7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 OR10J4P0C629 311 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 CD28P10747 220 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 SRSF3P84103 164 aaKnown RBP7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 PEA15Q15121 130 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 TCTEX1D4Q5JR98 221 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 C11orf44Q8N8P7 122 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 ZNF414Q96IQ9 312 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 FAM167A-AS1Q96KT0 104 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 SHANK2-AS3Q9BTD1 123 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 PAXXQ9BUH6 204 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 OR51M1Q9H341 326 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 MANBALQ9NQG1 85 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 TMEM167BQ9NRX6 74 aa7.43□□□□□ -1.22
HNRNPC-220ENST00000555585 IGHV4OR15-8A0A075B7B6 117 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 A0A087WW49 117 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 LOC102723971A0A1B0GUV8 181 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 ZNF98A6NK75 572 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 PAGE4O60829 102 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 HSPB1P04792 205 aaKnown RBP7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 PYYP10082 97 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 NPPCP23582 126 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 CDX1P47902 265 aaPredicted RBP7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 UBE2G2P60604 165 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 UBE2L3P68036 154 aaKnown RBP7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 RPEL1Q2QD12 228 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 FAM106AQ4KMX7 169 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 HIST2H2BDQ6DRA6 164 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 UQCC3Q6UW78 93 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 C18orf65Q6ZTR6 163 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 EIF4E3Q8N5X7 224 aaKnown RBP7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 KLHL30-AS1Q8NEE0 82 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 STXBP6Q8NFX7 210 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 RXFP4Q8TDU9 374 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 WIPF2Q8TF74 440 aaPredicted RBP7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 DPF1Q92782 380 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 ZNF503Q96F45 646 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 NARS2Q96I59 477 aaKnown RBP7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 METTL26Q96S19 204 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 RARRES2Q99969 163 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 RNF24Q9Y225 148 aa7.42□□□□□ -1.22
HNRNPC-220ENST00000555585 SETXQ7Z333 2677 aaKnown RBP7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 IGHV3-49A0A0A0MS15 119 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 A0A1W2PRX2 142 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 I3L521 148 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 SNRPCP09234 159 aaKnown RBP7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 BCL2P10415 239 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 PROK1P58294 105 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 PMS2P11Q13670 270 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 ICAM4Q14773 271 aa7.41□□□□□ -1.22
HNRNPC-220ENST00000555585 ZNF506Q5JVG8 444 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms