RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CASC2Q6XLA1 102 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 ANGPTL5Q86XS5 388 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 FAM213BQ8TBF2 198 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 FAM172AQ8WUF8 416 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 ZNF75CPQ92670 426 aaPredicted RBP-0.47□□□□□ -2.48
SNX6-204ENST00000555541 OR52E6Q96RD3 313 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 KIFC1Q9BW19 673 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 PBOV1Q9GZY1 135 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 IMP3Q9NV31 184 aaKnown RBP-0.47□□□□□ -2.48
SNX6-204ENST00000555541 HSPB8Q9UJY1 196 aa-0.47□□□□□ -2.48
SNX6-204ENST00000555541 KIF13BQ9NQT8 1826 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 OR4C46A6NHA9 309 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 HSBP1L1C9JCN9 74 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 SLC16A4O15374 487 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 SMIM17P0DL12 118 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 HIST1H1TP22492 207 aaPredicted RBP-0.48□□□□□ -2.49
SNX6-204ENST00000555541 SRP14P37108 136 aaKnown RBP-0.48□□□□□ -2.49
SNX6-204ENST00000555541 AP2S1P53680 142 aaPredicted RBP-0.48□□□□□ -2.49
SNX6-204ENST00000555541 ROMO1P60602 79 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 SPCS3P61009 180 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 CDK6Q00534 326 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 EIF3IQ13347 325 aaKnown RBP-0.48□□□□□ -2.49
SNX6-204ENST00000555541 C8orf74Q6P047 294 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 PDZD9Q8IXQ8 264 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 OR10K1Q8NGX5 313 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 OR10AG1Q8NH19 301 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 RAB37Q96AX2 223 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 MUCL1Q96DR8 90 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 RMND5BQ96G75 393 aaPredicted RBP-0.48□□□□□ -2.49
SNX6-204ENST00000555541 SLC25A21Q9BQT8 299 aaPredicted RBP-0.48□□□□□ -2.49
SNX6-204ENST00000555541 C20orf27Q9GZN8 174 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 NUP155O75694 1391 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 HSPG2P98160 4391 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 SCN10AQ9Y5Y9 1956 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 CACNA1AO00555 2505 aa-0.48□□□□□ -2.49
SNX6-204ENST00000555541 UNC13CQ8NB66 2214 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 ABCA2Q9BZC7 2435 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 LOC107984156A0A0G2JMH3 177 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 PRORSD1PA6NEY8 169 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 A8MWV9 139 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 M0R233 179 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 IFITM1P13164 125 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 SPINK13Q1W4C9 94 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 ASB16-AS1Q495Z4 193 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 CD200R1LQ6Q8B3 271 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 ARL17AQ8IVW1 177 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 FAM9CQ8IZT9 166 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 OR5AS1Q8N127 324 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 LPAR5Q9H1C0 372 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 HEATR1Q9H583 2144 aaKnown RBP-0.49□□□□□ -2.49
SNX6-204ENST00000555541 ARHGEF11O15085 1522 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 KDM6BO15054 1643 aa-0.49□□□□□ -2.49
SNX6-204ENST00000555541 KNTC1P50748 2209 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 LRP2P98164 4655 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 TRGV10A0A0A0MS01 117 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 A0A0A6YYH2 397 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 TRAV26-2A0A0B4J265 109 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 A6NJ64 397 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 J3QRK9 145 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 NDUFB3O43676 98 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 DCTN3O75935 186 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 DEXIO95424 95 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 CAV3P56539 151 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 DEFA3P59666 94 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 AP3S2P59780 193 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 RPL37AP61513 92 aaKnown RBP-0.5□□□□□ -2.49
SNX6-204ENST00000555541 KRR1Q13601 381 aaKnown RBP-0.5□□□□□ -2.49
SNX6-204ENST00000555541 C1orf134Q5TEV5 83 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 CLEC6AQ6EIG7 209 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 TMEM86BQ8N661 226 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 SLC25A40Q8TBP6 338 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 PLEKHB2Q96CS7 222 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 DCUN1D1Q96GG9 259 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 C2orf50Q96LR7 162 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 CCDC94Q9BW85 323 aaPredicted RBP-0.5□□□□□ -2.49
SNX6-204ENST00000555541 WRNQ14191 1432 aaPredicted RBP eCLIP-0.5□□□□□ -2.49
SNX6-204ENST00000555541 RIMBP3CA6NJZ7 1639 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 RIMBP3BA6NNM3 1639 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 RIMBP3Q9UFD9 1639 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 WNK2Q9Y3S1 2297 aa-0.5□□□□□ -2.49
SNX6-204ENST00000555541 MUC2Q02817 5179 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 hCG_1818297A0A087WSY0 165 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 A0A096LPI6 279 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 A8MT66 165 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 B4DSR2 109 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 C17orf112F2Z3M2 114 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 FXYD1O00168 92 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 OR7C1O76099 320 aaPredicted RBP-0.51□□□□□ -2.49
SNX6-204ENST00000555541 CALB1P05937 261 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 MYL5Q02045 173 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 HIST3H3Q16695 136 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 ACOT6Q3I5F7 207 aaPredicted RBP-0.51□□□□□ -2.49
SNX6-204ENST00000555541 C9orf84Q5VXU9 1444 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 VMO1Q7Z5L0 202 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 OR51A2Q8NGJ7 313 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 LIMD2Q9BT23 127 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 MRPS26Q9BYN8 205 aaKnown RBP-0.51□□□□□ -2.49
SNX6-204ENST00000555541 UCK1Q9HA47 277 aa-0.51□□□□□ -2.49
SNX6-204ENST00000555541 USE1Q9NZ43 259 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms