RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 EIF5AL1Q6IS14 154 aaKnown RBP4.86□□□□□ -1.63
LINC00643-203ENST00000555518 C10orf99Q6UWK7 81 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 ZNF502Q8TBZ5 544 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 SCGB1C1Q8TD33 95 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 WIPF2Q8TF74 440 aaPredicted RBP4.86□□□□□ -1.63
LINC00643-203ENST00000555518 ACY3Q96HD9 319 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 TRGV9Q99603 122 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 RPRMQ9NS64 109 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 TEP1Q99973 2627 aaKnown RBP4.86□□□□□ -1.63
LINC00643-203ENST00000555518 NF1P21359 2839 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 TCRBV4S1A1TA0A5B7 111 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 SEC14L6B5MCN3 397 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 UMAD1C9J7I0 102 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 TRIM77I1YAP6 450 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 IGHG4P01861 327 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 NPSP0C0P6 89 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 HIST1H1BP16401 226 aaKnown RBP4.85□□□□□ -1.63
LINC00643-203ENST00000555518 RAB5CP51148 216 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 FAM3BP58499 235 aaPredicted RBP4.85□□□□□ -1.63
LINC00643-203ENST00000555518 B2MP61769 119 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 RHOGP84095 191 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 ZNF90Q03938 601 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 TMEM41BQ5BJD5 291 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 FFAR4Q5NUL3 377 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 ETFRF1Q6IPR1 90 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 SPSB3Q6PJ21 355 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 Q6ZRG5 221 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 CYP2G1PQ6ZSU1 146 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 Q6ZSV7 163 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 Q71RC1 249 aaPredicted RBP4.85□□□□□ -1.63
LINC00643-203ENST00000555518 RPP25LQ8N5L8 163 aaKnown RBP4.85□□□□□ -1.63
LINC00643-203ENST00000555518 NECAP1Q8NC96 275 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 BPIFCQ8NFQ6 507 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 MYOZ3Q8TDC0 251 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 VN1R17PQ8TDU5 208 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 SAT2Q96F10 170 aaPredicted RBP4.85□□□□□ -1.63
LINC00643-203ENST00000555518 SCRT1Q9BWW7 348 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 NPFFR1Q9GZQ6 430 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 SEPSECSQ9HD40 501 aaKnown RBP4.85□□□□□ -1.63
LINC00643-203ENST00000555518 SLC39A9Q9NUM3 307 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 MED9Q9NWA0 146 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 C21orf62Q9NYP8 219 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 PXMP4Q9Y6I8 212 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 S4R3C0 116 aa4.85□□□□□ -1.63
LINC00643-203ENST00000555518 SETD2Q9BYW2 2564 aaPredicted RBP4.85□□□□□ -1.63
LINC00643-203ENST00000555518 TRAV1-1A0A0B4J248 108 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 FAM223BA6NKX1 122 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 ZNF705EA8MWA4 302 aaPredicted RBP4.84□□□□□ -1.63
LINC00643-203ENST00000555518 C17orf112F2Z3M2 114 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 TEX46H3BTG2 121 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 EIF3GO75821 320 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC00643-203ENST00000555518 TSPAN9O75954 239 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 IGHV3-23P01764 117 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 CTSGP08311 255 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 M6PRP20645 277 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 PSMB8P28062 276 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 PLP1P60201 277 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 CCL20P78556 96 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 C15orf32Q32M92 178 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 TIGITQ495A1 244 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 AKR1C8PQ5T2L2 129 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 SPATA31B1PQ5VZV4 182 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 PATE2Q6UY27 113 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 DPPA3Q6W0C5 159 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 FAM223AQ8IWN6 122 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 FAM213BQ8TBF2 198 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 LRRC20Q8TCA0 184 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 MBD3L1Q8WWY6 194 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 TMEM37Q8WXS4 190 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 DAZAP1Q96EP5 407 aaKnown RBP4.84□□□□□ -1.63
LINC00643-203ENST00000555518 MS4A10Q96PG2 267 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 CHRDL1Q9BU40 450 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 KCNIP2Q9NS61 270 aa4.84□□□□□ -1.63
LINC00643-203ENST00000555518 JMJD1CQ15652 2540 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 CTXND1A0A1B0GTU2 59 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 WI2-2373I1.2A0A1W2PRP0 233 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 TMEM89A2RUT3 159 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 ZFP92A6NM28 416 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 CYB5BO43169 146 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 CRLF1O75462 422 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 TRBV12-3P01733 135 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 TRGV3P03979 118 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 OR5G3P0C626 314 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 NPBWR1P48145 328 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 RAB9AP51151 201 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 MFAP4P55083 255 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 YPEL3P61236 119 aaPredicted RBP4.83□□□□□ -1.64
LINC00643-203ENST00000555518 RPL15P61313 204 aaKnown RBP4.83□□□□□ -1.64
LINC00643-203ENST00000555518 SELENOTP62341 195 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 SCGB2A2Q13296 93 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 ACOT6Q3I5F7 207 aaPredicted RBP4.83□□□□□ -1.64
LINC00643-203ENST00000555518 TCTEX1D4Q5JR98 221 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 DGAT2L7PQ6IED9 249 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 ZNF329Q86UD4 541 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 SLC7A5P1Q8MH63 180 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 ZNF709Q8N972 641 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 OR10G4Q8NGN3 311 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 OR10G9Q8NGN4 311 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 OR10G7Q8NGN6 311 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 ATP6V0BQ99437 205 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms