RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 IGHV3OR15-7A0A075B7D8 119 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 TRAV3A0A0B4J244 114 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 TEX50A0A1B0GTY4 177 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 FAM231BA6NCW3 169 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 C22orf46C9J442 243 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 CORTO00230 105 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 OR7C2O60412 319 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 ZNF253O75346 499 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 SERF1AO75920 110 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 HIST1H1EP10412 219 aaKnown RBP8.89□□□□□ -0.99
SRP54-205ENST00000554803 CBLN1P23435 193 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 ZNF137PP52743 207 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 RPL8P62917 257 aaKnown RBP8.89□□□□□ -0.99
SRP54-205ENST00000554803 ZNF124Q15973 351 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 LTC4SQ16873 150 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 TMEM136Q6ZRR5 245 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 C1orf229Q6ZS94 237 aaPredicted RBP8.89□□□□□ -0.99
SRP54-205ENST00000554803 TGIF2LXQ8IUE1 241 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 ZNRF1Q8ND25 227 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 OR5AN1Q8NGI8 311 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 OR4C13Q8NGP0 309 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 OR10X1Q8NGY0 326 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 C22orf15Q8WYQ4 148 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 TNFRSF14Q92956 283 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 IGF2BP2-AS1Q96M15 143 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 GAFA1Q96PS6 74 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 HSPB9Q9BQS6 159 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 ZNF430Q9H8G1 570 aaPredicted RBP8.89□□□□□ -0.99
SRP54-205ENST00000554803 AMMECR1Q9Y4X0 333 aaPredicted RBP8.89□□□□□ -0.99
SRP54-205ENST00000554803 ARHGAP32A7KAX9 2087 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 DSCAML1Q8TD84 2053 aa8.89□□□□□ -0.99
SRP54-205ENST00000554803 MSMBP08118 114 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 LINC00614P0C842 121 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 CT45A6P0DMU7 189 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 CT45A5P0DMU8 189 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 CT45A7P0DMV0 189 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 NDUFB7P17568 137 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 COL8A2P25067 703 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 IER3P46695 156 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 LGALS7P47929 136 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 RPS16P62249 146 aaKnown RBP8.88□□□□□ -0.99
SRP54-205ENST00000554803 PVRIGQ6DKI7 326 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 Q6ZWC4 215 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 MIR17HGQ75NE6 70 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 VKORC1L1Q8N0U8 176 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 OR8I2Q8N0Y5 310 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 GRAMD2BQ96HH9 432 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 SNHG12Q9BXW3 62 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 RNF24Q9Y225 148 aa8.88□□□□□ -0.99
SRP54-205ENST00000554803 TBL2Q9Y4P3 447 aaKnown RBP8.88□□□□□ -0.99
SRP54-205ENST00000554803 LOC105371242A0A075B767 164 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 IGHV1-69-2A0A0G2JMI3 117 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 TCRBV4S1A1TA0A5B7 111 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 PSMB11A5LHX3 300 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 COX7A2P2O60397 106 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 ZNF324O75467 553 aaPredicted RBP8.87□□□□□ -0.99
SRP54-205ENST00000554803 OR2J3O76001 311 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 APCSP02743 223 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 DEFA4P12838 97 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 CRYBB3P26998 211 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 UBE2L3P68036 154 aaKnown RBP8.87□□□□□ -0.99
SRP54-205ENST00000554803 KLF5Q13887 457 aaPredicted RBP8.87□□□□□ -0.99
SRP54-205ENST00000554803 VMA21Q3ZAQ7 101 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 FAM53AQ6NSI3 398 aaPredicted RBP8.87□□□□□ -0.99
SRP54-205ENST00000554803 LPAR2Q9HBW0 351 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 C1RLQ9NZP8 487 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 UQCR10Q9UDW1 63 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 TP53TG3Q9ULZ0 132 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 PPIAL4AQ9Y536 164 aa8.87□□□□□ -0.99
SRP54-205ENST00000554803 PGPEP1LA6NFU8 196 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 GGTLC3B5MD39 225 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 TMEM178BH3BS89 294 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 AVPP01185 164 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 IGLV2-8P01709 118 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 SAA1P0DJI8 122 aaPredicted RBP8.86□□□□□ -0.99
SRP54-205ENST00000554803 PMCHP20382 165 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 PRRX1P54821 245 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 SUMO1P63165 101 aaKnown RBP8.86□□□□□ -0.99
SRP54-205ENST00000554803 COL5A1-AS1Q5SY13 56 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 C10orf113Q5VZT2 155 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 SPATA31B1PQ5VZV4 182 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 TCF23Q7RTU1 214 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 S100A7AQ86SG5 101 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 CCL17Q92583 94 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 BORCS7Q96B45 105 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 FLYWCH2Q96CP2 140 aaKnown RBP8.86□□□□□ -0.99
SRP54-205ENST00000554803 HARBI1Q96MB7 349 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 SRSF8Q9BRL6 282 aaKnown RBP8.86□□□□□ -0.99
SRP54-205ENST00000554803 PAXXQ9BUH6 204 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 HINT2Q9BX68 163 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 GFRA4Q9GZZ7 299 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 GNB4Q9HAV0 340 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 ZNF492Q9P255 531 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 WASHC3Q9Y3C0 194 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 KLF12Q9Y4X4 402 aa8.86□□□□□ -0.99
SRP54-205ENST00000554803 TRBV6-1A0A0K0K1D8 114 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 GRIFINA4D1Z8 144 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 DIRC3C9JPN6 131 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 H0YJW9 148 aa8.85□□□□□ -0.99
SRP54-205ENST00000554803 SLC17A3O00476 420 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms