RNA–Protein interactions for RNA: ENST00000554732.5

LINC00639-202, long intergenic non-protein coding RNA 639, humanhuman

TSL 1 (best)

Gene LINC00639, Length 4,364 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-202ENST00000554732 TMEM249Q2WGJ8 235 aa11.3□□□□□ -0.6
LINC00639-202ENST00000554732 IGHV3OR16-13A0A075B7E8 117 aa11.3□□□□□ -0.6
LINC00639-202ENST00000554732 IGHV1-45A0A0A0MS14 117 aa11.3□□□□□ -0.6
LINC00639-202ENST00000554732 IGHV3-74A0A0B4J1X5 117 aa11.3□□□□□ -0.6
LINC00639-202ENST00000554732 A0A1B0GW15 77 aa11.3□□□□□ -0.6
LINC00639-202ENST00000554732 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
LINC00639-202ENST00000554732 FOXI3A8MTJ6 420 aaPredicted RBP11.29□□□□□ -0.6
LINC00639-202ENST00000554732 ATP5LO75964 103 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 TOMM40O96008 361 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 CD69Q07108 199 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 NGBQ9NPG2 151 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 TMEM95Q3KNT9 176 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 C10orf55Q5SWW7 151 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 GGTLC3B5MD39 225 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 C21orf140B9A014 251 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 PCOLCEQ15113 449 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 EXOC3-AS1Q8N2X6 119 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 ONECUT1Q9UBC0 465 aa11.29□□□□□ -0.6
LINC00639-202ENST00000554732 COL4A6Q14031 1691 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 WNT2P09544 360 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 SCGB3A1Q96QR1 104 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 TTTY12Q9BZ98 90 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 IGLC1P0CG04 106 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 RSPO1Q2MKA7 263 aaPredicted RBP11.28□□□□□ -0.6
LINC00639-202ENST00000554732 MORN2Q502X0 79 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 SAA2-SAA4A0A096LPE2 208 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 IGHV4-39P01824 125 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 SAA2P0DJI9 122 aaPredicted RBP11.28□□□□□ -0.6
LINC00639-202ENST00000554732 LGALS3P17931 250 aaKnown RBP11.28□□□□□ -0.6
LINC00639-202ENST00000554732 SRSF7Q16629 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00639-202ENST00000554732 RPRMLQ8N4K4 120 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 CHTOPQ9Y3Y2 248 aaKnown RBP11.28□□□□□ -0.6
LINC00639-202ENST00000554732 TMEM262E9PQX1 116 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 SAA1P0DJI8 122 aaPredicted RBP11.28□□□□□ -0.6
LINC00639-202ENST00000554732 ASCL4Q6XD76 172 aa11.28□□□□□ -0.6
LINC00639-202ENST00000554732 SP9P0CG40 484 aa11.27□□□□□ -0.6
LINC00639-202ENST00000554732 GCSAMQ8N6F7 178 aa11.27□□□□□ -0.6
LINC00639-202ENST00000554732 CACNG8Q8WXS5 425 aa11.27□□□□□ -0.6
LINC00639-202ENST00000554732 AMN1Q8IY45 258 aa11.27□□□□□ -0.61
LINC00639-202ENST00000554732 OR4C13Q8NGP0 309 aa11.27□□□□□ -0.61
LINC00639-202ENST00000554732 IDI2-AS1Q9NZ38 188 aa11.27□□□□□ -0.61
LINC00639-202ENST00000554732 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.27□□□□□ -0.61
LINC00639-202ENST00000554732 K7EMI3 77 aa11.27□□□□□ -0.61
LINC00639-202ENST00000554732 ARMS2P0C7Q2 107 aa11.27□□□□□ -0.61
LINC00639-202ENST00000554732 PLXNA3P51805 1871 aa11.27□□□□□ -0.61
LINC00639-202ENST00000554732 PSMB11A5LHX3 300 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 CRYBA4P53673 196 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 DSCAML1Q8TD84 2053 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 Q6ZS49 121 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 NOTCH4Q99466 2003 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 ZNF815PA8K554 130 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 CLUHP3Q96NS8 147 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 ABCA4P78363 2273 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 HTN1P15515 57 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 DLX6P56179 175 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 VGLL1Q99990 258 aa11.26□□□□□ -0.61
LINC00639-202ENST00000554732 M0R381 172 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 ETV2O00321 342 aaPredicted RBP11.25□□□□□ -0.61
LINC00639-202ENST00000554732 UPK2O00526 184 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 CFHR2P36980 270 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 SLC25A48Q6ZT89 311 aaKnown RBP11.25□□□□□ -0.61
LINC00639-202ENST00000554732 DLX4Q92988 240 aaPredicted RBP11.25□□□□□ -0.61
LINC00639-202ENST00000554732 METRNQ9UJH8 293 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 PSG8Q9UQ74 426 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 SCGB1A1P11684 91 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 TNRC6AQ8NDV7 1962 aaKnown RBP11.25□□□□□ -0.61
LINC00639-202ENST00000554732 NLRC5Q86WI3 1866 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 COX6A1P12074 109 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 TMEM155Q4W5P6 130 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 TMEM78Q5T7P6 136 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 SMIM20Q8N5G0 67 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 TNCP24821 2201 aa11.25□□□□□ -0.61
LINC00639-202ENST00000554732 NPIPB5A8MRT5 1133 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 NPIPB11E5RHQ5 1161 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 KLF17Q5JT82 389 aaPredicted RBP11.24□□□□□ -0.61
LINC00639-202ENST00000554732 PCP2Q8IVA1 136 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 NPFFR1Q9GZQ6 430 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 RPS20P60866 119 aaKnown RBP11.24□□□□□ -0.61
LINC00639-202ENST00000554732 LYZL1Q6UWQ5 148 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 VCX2Q9H322 139 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 SMIM27A0A1W2PRY6 76 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 TCRAP04437 139 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 WFDC2Q14508 124 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 Q6AWC8 147 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 PPP1R32Q7Z5V6 425 aa11.24□□□□□ -0.61
LINC00639-202ENST00000554732 MRPL20Q9BYC9 149 aaKnown RBP11.24□□□□□ -0.61
LINC00639-202ENST00000554732 YLPM1P49750 1951 aaKnown RBP11.24□□□□□ -0.61
LINC00639-202ENST00000554732 PRB3Q04118 309 aaPredicted RBP11.23□□□□□ -0.61
LINC00639-202ENST00000554732 G3V4G9 280 aa11.23□□□□□ -0.61
LINC00639-202ENST00000554732 ATP5IP56385 69 aaPredicted RBP11.23□□□□□ -0.61
LINC00639-202ENST00000554732 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
LINC00639-202ENST00000554732 RNFT1Q5M7Z0 435 aa11.23□□□□□ -0.61
LINC00639-202ENST00000554732 FAM216BQ8N7L0 139 aa11.23□□□□□ -0.61
LINC00639-202ENST00000554732 IGHV3-49A0A0A0MS15 119 aa11.23□□□□□ -0.61
LINC00639-202ENST00000554732 VDAC2P45880 294 aaPredicted RBP11.23□□□□□ -0.61
LINC00639-202ENST00000554732 ATP5G2Q06055 141 aa11.23□□□□□ -0.61
LINC00639-202ENST00000554732 DGAT2L7PQ6IED9 249 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms