RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 CYB561D1Q8N8Q1 229 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 ZNF114Q8NC26 417 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 SLC35E1Q96K37 410 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 MS4A10Q96PG2 267 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 TUBA4BQ9H853 241 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 SMCO4Q9NRQ5 59 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 COL7A1Q02388 2944 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 H3BQ15 152 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 M0R036 132 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 TRGV3P03979 118 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 RPL27AP46776 148 aaKnown RBP9.59□□□□□ -0.87
SHMT2-214ENST00000554604 B2MP61769 119 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 MEF2BQ02080 365 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-214ENST00000554604 WT1-ASQ06250 92 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 GAMTQ14353 236 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 C10orf55Q5SWW7 151 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 FAM90A2PQ658T7 463 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 SLC16A13Q7RTY0 426 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 CBLN2Q8IUK8 224 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 STPG3Q8N7X2 389 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 SRSF8Q9BRL6 282 aaKnown RBP9.59□□□□□ -0.87
SHMT2-214ENST00000554604 RPS10P5Q9NQ39 176 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 SLC45A2Q9UMX9 530 aa9.59□□□□□ -0.87
SHMT2-214ENST00000554604 IGLC7A0M8Q6 106 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 LINC01619G3V211 115 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 TMEM250H0YL14 139 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 ACTL6BO94805 426 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 IGHV3-11P01762 117 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 LGALS1P09382 135 aaKnown RBP9.58□□□□□ -0.88
SHMT2-214ENST00000554604 LINC00869P0C866 280 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 STAG3L2P0CL84 134 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 STAG3L3P0CL85 134 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 RHOBP62745 196 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 TNXAQ16473 311 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 C15orf54Q8N8G6 183 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 OR5T1Q8NG75 326 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 TVP23CQ96ET8 276 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 NIPSNAP3BQ9BS92 247 aa9.58□□□□□ -0.88
SHMT2-214ENST00000554604 PUS1Q9Y606 427 aaKnown RBP eCLIP9.58□□□□□ -0.88
SHMT2-214ENST00000554604 A0A087WWC5 75 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 OVOL1O14753 267 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 HMGB3O15347 200 aaKnown RBP9.57□□□□□ -0.88
SHMT2-214ENST00000554604 CXorf1O96002 111 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 INSL3P51460 131 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 CD81P60033 236 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 PNRC1Q12796 327 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-214ENST00000554604 GCSAMLQ5JQS6 135 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 ASPHD1Q5U4P2 390 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 ETFRF1Q6IPR1 90 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 TMEM68Q96MH6 324 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 TXNDC17Q9BRA2 123 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 TMPRSS5Q9H3S3 457 aa9.57□□□□□ -0.88
SHMT2-214ENST00000554604 A0A0G2JLM5 398 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 LOC105371267A0A1B0GV96 52 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 B4DEV8 164 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 H3BUA1 57 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 CORTO00230 105 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 EIF3GO75821 320 aaKnown RBP eCLIP9.56□□□□□ -0.88
SHMT2-214ENST00000554604 MT-CO2P00403 227 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 CRYGCP07315 174 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 ATF4P18848 351 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-214ENST00000554604 OR10J1P30954 320 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 CEBPGP53567 150 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 SLURP1P55000 103 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 SSBP2P81877 361 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-214ENST00000554604 THAP8Q8NA92 274 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 RNF2Q99496 336 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 C20orf24Q9BUV8 137 aa9.56□□□□□ -0.88
SHMT2-214ENST00000554604 IGHV4OR15-8A0A075B7B6 117 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 IGKV1OR2-108A0A075B7D4 117 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 A0A087WW49 117 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 COLCA2A8K830 154 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 TEX22C9J3V5 150 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 PAGE4O60829 102 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 SAP30O75446 220 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 APELAP0DMC3 54 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 DEFA4P12838 97 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 CYP2G1PQ6ZSU1 146 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 OR1P1Q8NH06 330 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 DLX4Q92988 240 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-214ENST00000554604 PRR25Q96S07 402 aa9.55□□□□□ -0.88
SHMT2-214ENST00000554604 FNDC4Q9H6D8 234 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-214ENST00000554604 ZNF727A8MUV8 499 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 F6UZH7 168 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 PDE6DO43924 150 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 OR5G3P0C626 314 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 ARL14EPLP0DKL9 152 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 SELENOTP62341 195 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 MLANAQ16655 118 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 IQCF2Q8IXL9 164 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 GATAD1Q8WUU5 269 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 SRSF12Q8WXF0 261 aaKnown RBP9.54□□□□□ -0.88
SHMT2-214ENST00000554604 MRPL32Q9BYC8 188 aaKnown RBP9.54□□□□□ -0.88
SHMT2-214ENST00000554604 SDF2L1Q9HCN8 221 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 NAT8Q9UHE5 227 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 FUT9Q9Y231 359 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 ZNF256Q9Y2P7 627 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-214ENST00000554604 F11RQ9Y624 299 aaKnown RBP9.54□□□□□ -0.88
SHMT2-214ENST00000554604 ARL2-SNX15V9GYD0 113 aa9.54□□□□□ -0.88
SHMT2-214ENST00000554604 MT-ND4LP03901 98 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms