RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 LY6LH3BQJ8 138 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 GNG7O60262 68 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 IGF2P01344 180 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 ZNF728P0DKX0 622 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 HLA-EP13747 358 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 RPL22P35268 128 aaKnown RBP2.59□□□□□ -1.99
SCFD1-211ENST00000554437 SUPT4H1P63272 117 aaKnown RBP2.59□□□□□ -1.99
SCFD1-211ENST00000554437 EMX2Q04743 252 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 KHDC3LQ587J8 217 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 TMEM14EPQ6UXP3 125 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 DPPA3Q6W0C5 159 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 PDZD9Q8IXQ8 264 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 DYNAPQ8N1N2 210 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 MMGT1Q8N4V1 131 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 TEX29Q8N6K0 151 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 Q8NAQ8 132 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 MAGOHBQ96A72 148 aaKnown RBP2.59□□□□□ -1.99
SCFD1-211ENST00000554437 ZNF714Q96N38 554 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 TCEAL7Q9BRU2 100 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 HS3ST2Q9Y278 367 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 TIMM9Q9Y5J7 89 aa2.59□□□□□ -1.99
SCFD1-211ENST00000554437 IBTKQ9P2D0 1353 aaPredicted RBP2.59□□□□□ -2
SCFD1-211ENST00000554437 NCAPD3P42695 1498 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 CACNA1SQ13698 1873 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 A0A0D9SG52 128 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 C7orf71A4D174 169 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 K7ERJ3 54 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 IFNA4P05014 189 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 TSPAN19P0C672 248 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 ZNF22P17026 224 aaPredicted RBP2.58□□□□□ -2
SCFD1-211ENST00000554437 ZNF25P17030 456 aaPredicted RBP2.58□□□□□ -2
SCFD1-211ENST00000554437 RAB5CP51148 216 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 COPZ1P61923 177 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 LYPD6Q86Y78 171 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 OR5D16Q8NGK9 328 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 OR8B2Q96RD0 313 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 GNG8Q9UK08 70 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 TNFSF18Q9UNG2 199 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 FAM215AQ9Y5M1 114 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 DISP2A7MBM2 1401 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 ZNF518AQ6AHZ1 1483 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 DSCAMO60469 2012 aa2.58□□□□□ -2
SCFD1-211ENST00000554437 LTBP4Q8N2S1 1624 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 SIPA1L1O43166 1804 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 TRGV5A0A0B4J1U4 118 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 TRBV27A0A0K0K1C4 114 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 C11orf86A6NJI1 115 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 GPX1P07203 203 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 IGLC6P0CF74 106 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 AQP4P55087 323 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 FOXF1Q12946 379 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 LYZL1Q6UWQ5 148 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 SOSTDC1Q6X4U4 206 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 CTAGE3PQ8IX95 158 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 Q8NDZ9 215 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 OR5A2Q8NGI9 324 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 CEP164Q9UPV0 1460 aa2.57□□□□□ -2
SCFD1-211ENST00000554437 VIRMAQ69YN4 1812 aaKnown RBP2.56□□□□□ -2
SCFD1-211ENST00000554437 TRAV7A0A075B6U4 112 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 H7C2G1 150 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 GNRH2O43555 120 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 LINC00694P0DN24 101 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 HES1Q14469 280 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 HAGHLQ6PII5 290 aaPredicted RBP2.56□□□□□ -2
SCFD1-211ENST00000554437 OR5H6Q8NGV6 325 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 NAT14Q8WUY8 206 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 PRELID3AQ96N28 172 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 DUSP21Q9H596 190 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 MINOS1-NBL1R4GNA1 71 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 DSPPQ9NZW4 1301 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 MAST2Q6P0Q8 1798 aa2.56□□□□□ -2
SCFD1-211ENST00000554437 XIRP1Q702N8 1843 aaKnown RBP2.56□□□□□ -2
SCFD1-211ENST00000554437 ZNF106Q9H2Y7 1883 aaKnown RBP2.56□□□□□ -2
SCFD1-211ENST00000554437 RER1O15258 196 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 NCR2O95944 276 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 MT-ND6P03923 174 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 CRYGSP22914 178 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 FXYD2P54710 66 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 DYNLT1P63172 113 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 HSD17B12Q53GQ0 312 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 TNS3Q68CZ2 1445 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 TMEM136Q6ZRR5 245 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 Q6ZS52 159 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 DEFB128Q7Z7B8 93 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 C3orf56Q8N813 242 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 OR4E2Q8NGC2 313 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 BANF2Q9H503 90 aa2.55□□□□□ -2
SCFD1-211ENST00000554437 SCN1AP35498 2009 aa2.54□□□□□ -2
SCFD1-211ENST00000554437 ARHGEF11O15085 1522 aa2.54□□□□□ -2
SCFD1-211ENST00000554437 SPATA31E1Q6ZUB1 1445 aa2.54□□□□□ -2
SCFD1-211ENST00000554437 PRG4Q92954 1404 aaPredicted RBP2.54□□□□□ -2
SCFD1-211ENST00000554437 RTL9Q8NET4 1388 aa2.54□□□□□ -2
SCFD1-211ENST00000554437 TRBV10-2A0A0K0K1G8 114 aa2.54□□□□□ -2
SCFD1-211ENST00000554437 SDCBPO00560 298 aaPredicted RBP2.54□□□□□ -2
SCFD1-211ENST00000554437 NPFFO15130 113 aa2.54□□□□□ -2
SCFD1-211ENST00000554437 IGKV4-1P06312 121 aa2.54□□□□□ -2
SCFD1-211ENST00000554437 COX6A1P12074 109 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms