RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TMED7-TICAM2A0A0A6YYA0 188 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 B4DEV8 164 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 C8orf87E5RJ46 101 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 FNDC10F2Z333 226 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 F5H5P2 479 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 DUS4LO95620 317 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 PPP1R3DO95685 299 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 ATP5G1P05496 136 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 LGALS1P09382 135 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 RAB5AP20339 215 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 RPS4Y1P22090 263 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 BTCP35070 178 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 ADMP35318 185 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 GRB2P62993 217 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 RPL18AQ02543 176 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 FOXF1Q12946 379 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM187Q14656 261 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 ECSCRQ19T08 205 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 GSG1Q2KHT4 349 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF626Q68DY1 528 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 AMMECR1LQ6DCA0 310 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 ANKRD29Q8N6D5 301 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 OR11H6Q8NGC7 330 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 OR5A1Q8NGJ0 315 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 OR10AC1Q8NH08 325 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 NEUROG1Q92886 237 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 FXYD5Q96DB9 178 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 SLC25A44Q96H78 314 aaPredicted RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 VAMP8Q9BV40 100 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 MMP26Q9NRE1 261 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 FKBP11Q9NYL4 201 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 BET1LQ9NYM9 111 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 RPUSD1Q9UJJ7 312 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 USF3Q68DE3 2245 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 MAP1AP78559 2803 aaPredicted RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 HEATR1Q9H583 2144 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.14□□□□□ -2.071e-8■■■■■ 27.5
PRPF39-206ENST00000554429 TRAV26-2A0A0B4J265 109 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 RBMY1BA6NDE4 496 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 RBMY1EA6NEQ0 496 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 K7EPK0 472 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 SULT2B1O00204 365 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 MPPED1O15442 326 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 NDUFC2O95298 119 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 FSTL3O95633 263 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 IGKV3-15P01624 115 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 RBMY1DP0C7P1 496 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 RBMY1A1P0DJD3 496 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF728P0DKX0 622 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 MPGP29372 298 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 CFHR3Q02985 330 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 GAGE2BQ13066 116 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 DAZ2Q13117 558 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 CD226Q15762 336 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 DUSP5Q16690 384 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 GAGE2EQ4V326 116 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 MIDNQ504T8 468 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF506Q5JVG8 444 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 SLC25A30Q5SVS4 291 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 GFI1BQ5VTD9 330 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 GAGE2AQ6NT46 116 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 Q6ZWC4 215 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 Q75L30 129 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 ATP5L2Q7Z4Y8 100 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 DAZ4Q86SG3 579 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 FAM71E2Q8N5Q1 922 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 C3orf56Q8N813 242 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 OR4C3Q8NH37 302 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 DDB2Q92466 427 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM18Q96B42 140 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 MALSU1Q96EH3 234 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 PHYHIPLQ96FC7 376 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 OR4C12Q96R67 309 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 S100A13Q99584 98 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 DAZ1Q9NQZ3 744 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 DAZ3Q9NR90 486 aaKnown RBP2.14□□□□□ -2.07
PRPF39-206ENST00000554429 MTFP1Q9UDX5 166 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 GAGE2DQ9UEU5 116 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 VPS13CQ709C8 3753 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 COL6A5A8TX70 2615 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 FREM1Q5H8C1 2179 aa2.14□□□□□ -2.07
PRPF39-206ENST00000554429 A0A1B0GWB2 263 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 LYRM9A8MSI8 78 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 H3BQ15 152 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 J3QQQ9 107 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 NDUFS7O75251 213 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 APOHP02749 345 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 OR5AC1P0C628 307 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 CTLA4P16410 223 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 GUCA1AP43080 201 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 ATP5G3P48201 142 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 H2BFSP57053 126 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 UBE2NP61088 152 aaKnown RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 IL15RAQ13261 267 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF322Q6U7Q0 402 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF525Q8N782 197 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 OR5D14Q8NGL3 314 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 SLC25A40Q8TBP6 338 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 Q8TCH9 128 aa2.13□□□□□ -2.07
PRPF39-206ENST00000554429 LRRC29Q8WV35 223 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms