RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TRBV12-3P01733 135 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 C8orf88P0DMB2 117 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 ZP3P21754 424 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 TAGLN2P37802 199 aaKnown RBP5.89□□□□□ -1.47
TDP1-209ENST00000554180 PSMB3P49720 205 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 PPT1P50897 306 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 FOXL1Q12952 345 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 USF2Q15853 346 aaPredicted RBP5.89□□□□□ -1.47
TDP1-209ENST00000554180 TOMM20LQ6UXN7 152 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 PATE2Q6UY27 113 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 SSX7Q7RTT5 188 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 LINC00305Q7Z4B0 112 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 GPHB5Q86YW7 130 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 PCNPQ8WW12 178 aaKnown RBP5.89□□□□□ -1.47
TDP1-209ENST00000554180 TMEM190Q8WZ59 177 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 ZNF414Q96IQ9 312 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 SHANK2-AS3Q9BTD1 123 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 SLC25A39Q9BZJ4 359 aaPredicted RBP5.89□□□□□ -1.47
TDP1-209ENST00000554180 HRH4Q9H3N8 390 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 DOK5Q9P104 306 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 TSSC4Q9Y5U2 329 aaPredicted RBP5.89□□□□□ -1.47
TDP1-209ENST00000554180 ARL2-SNX15V9GYD0 113 aa5.89□□□□□ -1.47
TDP1-209ENST00000554180 CUBNO60494 3623 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 RAB19A4D1S5 217 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 ANKRD34BA5PLL1 514 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 HSPB1P04792 205 aaKnown RBP5.88□□□□□ -1.47
TDP1-209ENST00000554180 ARL14EPLP0DKL9 152 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 CRYBB3P26998 211 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 RPEL1Q2QD12 228 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 FAM106AQ4KMX7 169 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 KHDC1LQ5JSQ8 128 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 SPATA31B1PQ5VZV4 182 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 LCN15Q6UWW0 184 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 MIR17HGQ75NE6 70 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 EIF4E3Q8N5X7 224 aaKnown RBP5.88□□□□□ -1.47
TDP1-209ENST00000554180 NARS2Q96I59 477 aaKnown RBP5.88□□□□□ -1.47
TDP1-209ENST00000554180 FAM167A-AS1Q96KT0 104 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 GPR82Q96P67 336 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 UHRF2Q96PU4 802 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 OR5B12Q96R08 314 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 METTL26Q96S19 204 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 DAZ1Q9NQZ3 744 aaKnown RBP5.88□□□□□ -1.47
TDP1-209ENST00000554180 TMEM167BQ9NRX6 74 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 TMEM14CQ9P0S9 112 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 RABAC1Q9UI14 185 aa5.88□□□□□ -1.47
TDP1-209ENST00000554180 IGHV3-35A0A0C4DH35 117 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 ZNF98A6NK75 572 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 A8MWP6 167 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 LINC01619G3V211 115 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 K7EMT4 169 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 LGALS9O00182 355 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 OR7C2O60412 319 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 NDUFS6O75380 124 aaKnown RBP5.87□□□□□ -1.47
TDP1-209ENST00000554180 IFNA1P01562 189 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 CD28P10747 220 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 RPL7P18124 248 aaKnown RBP5.87□□□□□ -1.47
TDP1-209ENST00000554180 NPPCP23582 126 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 HOXD3P31249 432 aaPredicted RBP5.87□□□□□ -1.47
TDP1-209ENST00000554180 BMI1P35226 326 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 FHL3Q13643 280 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 C1orf194Q5T5A4 169 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 UQCC3Q6UW78 93 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 REC114Q7Z4M0 266 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 COMMD7Q86VX2 200 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 BPIFA4PQ86YQ2 179 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.87□□□□□ -1.47
TDP1-209ENST00000554180 KLHL30-AS1Q8NEE0 82 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 SUN5Q8TC36 379 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 MARC2Q969Z3 335 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 FAM210AQ96ND0 272 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 TXNDC17Q9BRA2 123 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 SLC25A2Q9BXI2 301 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 SMDT1Q9H4I9 107 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 MANBALQ9NQG1 85 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 UFC1Q9Y3C8 167 aa5.87□□□□□ -1.47
TDP1-209ENST00000554180 IGHV4OR15-8A0A075B7B6 117 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 A0A087WW49 117 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 A0A1W2PS18 150 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 HMGB3O15347 200 aaKnown RBP5.86□□□□□ -1.47
TDP1-209ENST00000554180 BUB3O43684 328 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 BCL2P10415 239 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 GP9P14770 177 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 GCHFRP30047 84 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 FGF8P55075 233 aaPredicted RBP5.86□□□□□ -1.47
TDP1-209ENST00000554180 UBE2L3P68036 154 aaKnown RBP5.86□□□□□ -1.47
TDP1-209ENST00000554180 MORN5Q5VZ52 161 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 UNQ9165/PRO28630Q6UXU0 137 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 NDUFA11Q86Y39 141 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 C1QL4Q86Z23 238 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 OR1N2Q8NGR9 330 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 ZNF503Q96F45 646 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 CITED2Q99967 270 aaPredicted RBP5.86□□□□□ -1.47
TDP1-209ENST00000554180 PAXXQ9BUH6 204 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 C20orf24Q9BUV8 137 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 SCRT1Q9BWW7 348 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 OR51M1Q9H341 326 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 TMEM231Q9H6L2 316 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 U3KQE9 123 aa5.86□□□□□ -1.47
TDP1-209ENST00000554180 TRAV5A0A0B4J249 113 aa5.85□□□□□ -1.47
TDP1-209ENST00000554180 A0A1B0GV50 99 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms